RetrogeneDB ID: | retro_meug_1441 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold40615:135..486(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CCDC53 | ||
Ensembl ID: | ENSMEUG00000004888 | ||
Aliases: | None | ||
Description: | coiled-coil domain containing 53 [Source:HGNC Symbol;Acc:24256] |
Percent Identity: | 68.91 % |
Parental protein coverage: | 62.57 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MDEDGLPLMGSGIDLTKVPAIQQKR-TVAFLNQFVVHTVQFLNR-FSTVCEEKLSALSLRIQQIETTLNI |
MD.DGLPLMGSGID.TKV..IQQKR..VAFLNQF..HTV.FLNR.F..VCEEKLS.LSL.IQQ.E.TLN. | |
Retrocopy | MDKDGLPLMGSGIDVTKVSTIQQKR<DVAFLNQFMIHTV*FLNR>FFMVCEEKLSVLSLQIQQTEITLNT |
Parental | LDAKLSSIPGLEDVKFEISTANVNGVPNGPEAPSGQQKSIQDTGPQKCE |
LDAKL.S..GLEDVKFEI..A..NGV.NGPEAPS..Q.S....G..... | |
Retrocopy | LDAKLLSNLGLEDVKFEIMAAHLNGVTNGPEAPSS*QSSLSQSGQKSIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |