RetrogeneDB ID: | retro_meug_1625 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold49370:916..1281(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | REEP5 | ||
Ensembl ID: | ENSMEUG00000006088 | ||
Aliases: | None | ||
Description: | receptor accessory protein 5 [Source:HGNC Symbol;Acc:30077] |
Percent Identity: | 53.66 % |
Parental protein coverage: | 70.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GYGASLLCNLIGFGYPAYVSIKAIESPNKEDDTQWLTYWVVYGVFSIAE-FFSDLFLSWFPFYYMLKCGF |
GYGASLLC.LIGF...AY.SIKA.ESP.K.D...WLTYW.VY..F...E..F.D.FL.WF.F.Y..K..F | |
Retrocopy | GYGASLLCHLIGFICSAYASIKATESPSKDDNAIWLTYWLVYSIFGLVE<VFFDIFLFWFFFCYAEKFAF |
Parental | LLWCMAPSPSNGAEMLYRRIIRPFFLKHESQMDNVVKDLKDKAKETADAIAKE |
LLW.M.P...NG...L..R.I.P.FL.H...MDN.V.DL...A..TA.....E | |
Retrocopy | LLWFMLPMACNGSQIL*CRLICPIFLRHQTSMDNLVTDLSGWALNTAASLTQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Echinops telfairi | ENSETEG00000010270 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000006088 | 4 retrocopies | |
Tursiops truncatus | ENSTTRG00000001691 | 1 retrocopy | |
Drosophila melanogaster | FBgn0033906 | 1 retrocopy |