>retro_meug_1714
GATAGCTGCTTCTCAGATGATGGGAATACTGGGGGCCTGCCTTCAGAATTTGAAAACCTTGAGTTTCTCAGCATGATCGA
CATCAACCTTGTGTCTTTGGCCAACCTACCCAAGCTTTCCCGACTTCGAAAGTTGGAGCTCAGTGATAACCATCTCTCTG
GAGGCCTGGAGGTCCTGGCCCAACCAACAGCCAGCCTGATCCGGCTAAACCTGAGTGGGAACAAAATCAAGGATATCGAC
ACCGTGGAGCCCCTGAAGAAGCTGCCAAACCTCAAGAGCCCGGACCTTTTCAAATGCAATGTGACCATGCTGATGAGCTA
T
ORF - retro_meug_1714 Open Reading Frame is conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
85.98 % |
Parental protein coverage: |
92.24 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
0 |
Retrocopy - Parental Gene Alignment:
Parental | DNCFSDDGKIGGLSSEFENLEFLSMVDINLVSLANLPKLPRLRKLELSDNHLSGGLEVLAERTPSLVQLN |
| D.CFSDDG..GGL.SEFENLEFLSM.DINLVSLANLPKL.RLRKLELSDNHLSGGLEVLA..T.SL..LN |
Retrocopy | DSCFSDDGNTGGLPSEFENLEFLSMIDINLVSLANLPKLSRLRKLELSDNHLSGGLEVLAQPTASLIRLN |
|
Parental | LSGNKIKDINTLEPLKKLPNLKSLDLFKCDVTMLMSY |
| LSGNKIKDI.T.EPLKKLPNLKS.DLFKC.VTMLMSY |
Retrocopy | LSGNKIKDIDTVEPLKKLPNLKSPDLFKCNVTMLMSY |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Macropus eugenii was not studied using RNA-Seq expression data.
Macropus eugenii was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_meug_1714 retrocopy.
Macropus eugenii was not studied using FANTOM5 data.
retro_meug_1714 was not experimentally validated.
Retrocopy orthology:
Macropus eugenii does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
1 parental gene, and
3 retrocopies.