RetrogeneDB ID: | retro_meug_1719 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold54763:7878..8148(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | IDI2 | ||
Ensembl ID: | ENSMEUG00000015260 | ||
Aliases: | None | ||
Description: | isopentenyl-diphosphate delta isomerase 2 [Source:HGNC Symbol;Acc:23487] |
Percent Identity: | 52.22 % |
Parental protein coverage: | 73.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | IVVDENDWVIDTESKLNCHLNKNIEKXXXHRAFSVVLFNSKNQLLVQERADNKITFPVYFTDSCSSHPLS |
I...END..I.T....NC.LNKNI.K...H.AF.V.LFN..N.LL.Q.R.D.KITF...F.....SHPLS | |
Retrocopy | ILINENDNKIGTKTEKNCCLNKNIDKGLLHKAFTVFLFNTENMLLLQQRLDAKITFQNCFANTYCSHPLS |
Parental | NTLELDENNAVGVRRAAQRQ |
N..EL.ENN....R..AQ.Q | |
Retrocopy | NPTELEENNTMELRWVAQKQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000008984 | 5 retrocopies | |
Macropus eugenii | ENSMEUG00000015260 | 1 retrocopy |
retro_meug_1719 ,
|
Tupaia belangeri | ENSTBEG00000009538 | 1 retrocopy |