RetrogeneDB ID: | retro_meug_1902 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold70332:16306..16789(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBAC2 | ||
Ensembl ID: | ENSMEUG00000014722 | ||
Aliases: | None | ||
Description: | UBA domain containing 2 [Source:HGNC Symbol;Acc:20486] |
Percent Identity: | 71.17 % |
Parental protein coverage: | 54.42 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KAPLSKSLLLVPS-TLSILLALLFQHYQNFFVYNLQAVKNDLQIWRLICGRIICLDLKDTFCSSLLIYNF |
K..L.KSLLLVP....SILLALLFQHYQNFF.YNLQ..K.DLQ..RLICGRIIC.DLKDTFCS.LLI.NF | |
Retrocopy | KVALPKSLLLVPE<AFSILLALLFQHYQNFFAYNLQTIKTDLQVQRLICGRIICHDLKDTFCSGLLIHNF |
Parental | RIFE-RRYGSRK-FASFLLGSWILSALFDLILVEAMQYSFGITASNLPSGFLGPVFALFVPFYCSIPRVQ |
.I......G....F.SF..GSWILS.LFDLILV.A...SF.ITAS.LPSGFLGPVF.LFVPFY..I.RV. | |
Retrocopy | GIVS*KEIGQQE>FTSFSWGSWILSVLFDLILVRASPCSFSITASYLPSGFLGPVFTLFVPFYSYISRVK |
Parental | VTQILGQVSITNKTLIYVLGLQL |
VTQ.LG..SITN.TLIY.LGLQL | |
Retrocopy | VTQTLGKFSITNATLIYILGLQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000000639 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000005108 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014722 | 1 retrocopy |
retro_meug_1902 ,
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