RetrogeneDB ID: | retro_meug_328 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold102000:12475..12826(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C11orf74 | ||
Ensembl ID: | ENSMEUG00000003065 | ||
Aliases: | None | ||
Description: | chromosome 11 open reading frame 74 [Source:HGNC Symbol;Acc:25142] |
Percent Identity: | 76.07 % |
Parental protein coverage: | 53.81 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | DFLDLEDFDKDEETDHKLSRELLLLPGEVEEEVHFSVSGYVPSFDQNSHPEPK---TANRTDEHLEEVPG |
.FLDLEDFDKDEETD.KLSRELLLLPGE.EE.VHFS.SGYVPSFDQNS.PE.K...T......HL.EVPG | |
Retrocopy | NFLDLEDFDKDEETDYKLSRELLLLPGEIEEDVHFSISGYVPSFDQNSYPEQKTCPTEQLAYGHLQEVPG |
Parental | DEVEPFSLDEDFDYDSVVLTPKFSSADIKAIREMSSK-QTNPDLETR |
D.VE.FSLDEDFDYDSVVLTPKFSSA..KAIRE.SS.....PD.ETR | |
Retrocopy | DKVESFSLDEDFDYDSVVLTPKFSSAEMKAIRETSSQSRLKPDPETR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000010963 | 2 retrocopies | |
Homo sapiens | ENSG00000166352 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000004773 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000003065 | 1 retrocopy |
retro_meug_328 ,
|
Microcebus murinus | ENSMICG00000008620 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000019838 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000003347 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000003514 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000004277 | 2 retrocopies |