>retro_meug_363
ATGCATGCACTGGAGATAGCAGGGAAATGGAGAGTCATCTTACATTCCACAGGAAGTCATCAGTAGTGTTACCCAGCTCC
TCGAGGACCCACTTCAGAGGGAGTTCATTCAAAAATACCTGCAAAGTGAGCCTGCCTGTCGGCCTACAACCAGAGAAATA
CTTTTCCATCCTGTACTGTTTAAGATGTCCTCACTCAAACTGCTTGCTACACATTGCATTGTGGGACACCACCACCTCAT
ACCAGAAAATGCCCTGGAGGAGATCACCAAGAACATGAACACCAATGCTGTACTGGCAGAAATCCCTCCAGGACCTGGGA
GGGAACTTTATCAGACCCTGTATTCTCAGTCACCAGCTCTGGAATTGGAAAAGTTCCTTGAAGATGTAAGAAATGGGATC
TACCCCCTACGGGCCTTTGGGCTACTTTGGCCC
ORF - retro_meug_363 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
50.34 % |
Parental protein coverage: |
55.04 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | MAVLEI-QSNGDTR-VTEEAIARARHSLSDPNMREFILSCLVLDPACRPSAHNLLFHRVLFEVHSLKLLA |
| M..LEI.Q.NG.......E.I......L.DP..REFI...L...PACRP.....LFH.VLF...SLKLLA |
Retrocopy | MHALEI>QGNGESSYIPQEVISSVTQLLEDPLQREFIQKYLQSEPACRPTTREILFHPVLFKMSSLKLLA |
|
Parental | AHCFIQHQYLMPENVVEEKTKVIDLNMVMAEI-HRTGRPRVQWRYSEVSFLELDKFLEDVRNGIYPLMNF |
| .HC...H..L.PEN..EE.TK....N.V.AEI....GR...Q..YS....LEL.KFLEDVRNGIYPL..F |
Retrocopy | THCIVGHHHLIPENALEEITKNMNTNAVLAEIPPGPGRELYQTLYSQSPALELEKFLEDVRNGIYPLRAF |
|
Parental | AASRP |
| ....P |
Retrocopy | GLLWP |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Macropus eugenii was not studied using RNA-Seq expression data.
Macropus eugenii was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_meug_363 retrocopy.
Macropus eugenii was not studied using FANTOM5 data.
retro_meug_363 was not experimentally validated.
Retrocopy orthology:
Macropus eugenii does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
1 parental gene, and
1 retrocopy.