>retro_meug_507
TTGGAGGGCCTAGCCGGCACCATTACCTCCAAAGAGTGGAGCTTTCCCACCTCTTCTGAGGGGAGCAACATCTCCGAGGG
CAGCGAGACTTTGGACAAACCCATTGACAATGATGCAGAGGGAGTGTGGAGCCCTGACATTGAGCAGAGCTTCCAAGAAG
CCCTTGCCATCTACCCACTCTGTGGCAGGTGCAAGATCATCTTATCGGATAAGGGCAAGATGTGTGGCAGTAATGAGCTG
ATTGTTCATTGTATTAAGCTCCAGACAGGGAAAACTCGAACCAGGAAGCAGGTATCTAGCCACATCCAGGTACTGGCCTA
TCATAAAACCCGGGAGATCCAAGTCAAGTTAAAGGGTCAGGCAGCTAAGGACAAAGCCCTACAGAATATGGCTACCATGT
CATCTTCTCAGATCATCTCTGCTACAGCCTTCCACAATAAAATGGCCCTTACTCGGGGACCAGCATAACCAGCCACCTCA
GGGTTTTGTCAAGGAACTTTGCCAGGCCAAGCTGGAACTTCCCATGATGTAAAACCTTTCTCTCAACAAACCTACGCTGT
TCAGCCCCTGCTCCCTTTGCCAGGGTTTGAATCTCCTGCTGGATCTACCCTGTCACCGTCAACCCCTCCATGTCAAGGCC
GAAGTGTGGCCAGCTCCAAGCTCTGGATGTTGGAGTTCTCTGCCTTCTTGGAGCAGCAGCAAGACCCAGACATGTATAAC
AAGCACCTATTTGTACACATTGGCCAGTCCAGTCCCAGCTACAGTGACCCCTACCTCAAAGCAGTGGATATCCACCAGAT
CTATGACAAATTCCCTGATAAAAAGGGAGGACTCAAGGAACTCTTTGAACAAGGACCCTCAAATGCCTTCTTCCTTGTCA
AATTCTGGGCTGACCTCAACACCAACATGGAGGACAAAGGCAGCTCTTTTTATGGTGTCTCCAGTCAGTATGAGAGTCCT
GAGAACATGATCATCACCTGCTCCACCAAAGTCTGCTCCTTTGGCAAACAGGTTGTGGAGAAAGTAGAGACAGATTACGC
CCACTATGAGAATGGCCACTAATCGTATGGAATTCACCAATCTCCTCTC
ORF - retro_meug_507 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
88.43 % |
Parental protein coverage: |
84.19 % |
Number of stop codons detected: |
2 |
Number of frameshifts detected |
0 |
Retrocopy - Parental Gene Alignment:
Parental | LEGLAGTITSNEWSSPTSPEGSNVSEGSEALDKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSD |
| LEGLAGTITS.EWS.PTS.EGSN.SEGSE.LDKPIDNDAEGVWSPDIEQSFQEALAIYP.CGR.KIILSD |
Retrocopy | LEGLAGTITSKEWSFPTSSEGSNISEGSETLDKPIDNDAEGVWSPDIEQSFQEALAIYPLCGRCKIILSD |
|
Parental | EGKMY-RNELIARYIKLRTGXXXXXXXVSSHIQVLARRKAREIQAKLKDQAAKDKALQNMATMSSAQIIS |
| .GKM...NELI...IKL.TG.......VSSHIQVLA..K.REIQ.KLK.QAAKDKALQNMATMSS.QIIS |
Retrocopy | KGKMCGSNELIVHCIKLQTGKTRTRKQVSSHIQVLAYHKTREIQVKLKGQAAKDKALQNMATMSSSQIIS |
|
Parental | ATAFHNKMALTRGPAYPAVSGFWQGTLPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGSTLSPSTPP |
| ATAFHNKMALTRGPA.PA.SGF.QGTLPGQAGTSHDVKPFSQQTYAVQP.LPLPGFESPAGSTLSPSTPP |
Retrocopy | ATAFHNKMALTRGPA*PATSGFCQGTLPGQAGTSHDVKPFSQQTYAVQPLLPLPGFESPAGSTLSPSTPP |
|
Parental | WQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIHQIYDKFPDKKGGLKE |
| .QGRSVASSKLWMLEFSAFLEQQQDPD.YNKHLFVHIGQSSPSYSDPYL.AVDIHQIYDKFPDKKGGLKE |
Retrocopy | CQGRSVASSKLWMLEFSAFLEQQQDPDMYNKHLFVHIGQSSPSYSDPYLKAVDIHQIYDKFPDKKGGLKE |
|
Parental | LFERGPSNAFFLVKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYAHYE |
| LFE.GPSNAFFLVKFWADLNTN.ED.GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVET.YAHYE |
Retrocopy | LFEQGPSNAFFLVKFWADLNTNMEDKGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETDYAHYE |
|
Parental | NGHYSYRIHRSPL |
| NGH.SY.IH.SPL |
Retrocopy | NGH*SYGIHQSPL |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Macropus eugenii was not studied using RNA-Seq expression data.
Macropus eugenii was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_meug_507 retrocopy.
Macropus eugenii was not studied using FANTOM5 data.
retro_meug_507 was not experimentally validated.
Retrocopy orthology:
Macropus eugenii does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
2 parental genes, and
3 retrocopies.