RetrogeneDB ID: | retro_meug_665 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold15468:4606..5082(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLC25A31 | ||
Ensembl ID: | ENSMEUG00000002187 | ||
Aliases: | None | ||
Description: | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 [Source:HGNC Symbol;Acc:25319] |
Percent Identity: | 51.25 % |
Parental protein coverage: | 66.24 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | TRLGVDIGKGPDERQFKGLGDC-VKIARSDGITGLYRGFGVSVQGIIVYRASYFGCYDTIKGLLPNPKEI |
TRL....GK...ER.FKGLG.C.VK...SDGI.GLY.GF.VSVQGII.YRA.YFG.YDT.KG.LP.PK.. | |
Retrocopy | TRLAAEAGKSGTEREFKGLGECLVKVSKSDGIRGLYQGFSVSVQGIIMYRAAYFGIYDTAKGTLPYPKNT |
Parental | PFLVSFLIAQVV-TSCSGILS-YPFDTVRRRMMMQSGEAERQYQGTMDCFSKIYRHEGPTAFFRGAFSNV |
....S..IAQ....S..G.LS.......R..M..........Y.GT..C..KI....G..AFF.GA.SN. | |
Retrocopy | RIVISWMIAQ*L>CSRCGLLS>FDIVRLRMMMQSGHKGVDIMYTGTIEC*KKIAKDGGGKAFFKGAWSNG |
Parental | LRGTGGALVLVLYDKIKALL |
LRG.GGA..LVLYD..K... | |
Retrocopy | LRGMGGAFMLVLYDELKKVI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000002187 | 1 retrocopy |
retro_meug_665 ,
|
Macropus eugenii | ENSMEUG00000008508 | 4 retrocopies | |
Ochotona princeps | ENSOPRG00000004154 | 2 retrocopies |