RetrogeneDB ID: | retro_meug_675 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold1583:54191..54608(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1AD | ||
Ensembl ID: | ENSMEUG00000004948 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1A domain containing [Source:HGNC Symbol;Acc:28147] |
Percent Identity: | 59.03 % |
Parental protein coverage: | 86.42 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | KRKHVVQEVLGEHMVPSDQQQIVRVLGTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD-PI |
K.KH.V..VLGEHM.PSD.Q.I..VLGTPGNN........G...LVSMPSKY.K.I.IK..DFLI.D.P. | |
Retrocopy | KWKHEV*KVLGEHMEPSDWQYIIMVLGTPGNNCMR*RLPRGST-LVSMPSKYHKSI*IKTDDFLILD<PY |
Parental | EEGEKVKAE-ISFVLCKDHVRSLQKEGLWPEAFSEVAEKQ-NSRSRPPQPEL-PGEAQSSEDDSSADDSD |
.E....K....S.VLCKDH...LQKE.LWPEA.SEV.EKQ..SR...PQ.EL.P...QSS.D.SS.DDSD | |
Retrocopy | GERGEGKGQ<VSCVLCKDHICFLQKERLWPEAISEVMEKQSHSRNISPQSEL<PEKTQSSKDASSEDDSD |
Parental | LFVN |
L..N | |
Retrocopy | LLDN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000004948 | 1 retrocopy |
retro_meug_675 ,
|
Monodelphis domestica | ENSMODG00000008964 | 2 retrocopies |