>retro_meug_7
ATGCCTGCCCTCACTGAATTGTTTAGTCATATTGATAAACACCAGGATCAGTACATAAAGAAGCTTGCAGAATGGGTGGC
AATCCAGAGCATTTCTGCACGGCCAGAGAAAAGAGAAGAAATCAATCGAATGATGGAAGTTGCCGCTGCAAACATAAGAC
AACTCGGTGGCACCACTGAGCTGATAGACATTGGAAAACAAAAGCTCCATGACGGCTCAGAAATACCTCTTCCTCCTATT
TTACTTGGCACACTGGGCTCAGATCCCCTAAAGAAAACTGTGTGTGTCTATGGACATCTGGATGTACAACCAGCAGCTCT
GGAGGATGGCTGGGACAGTGAGCCCTTCACATTGGTAGAAAGAGATGGAAAACTCTATGGAAGAGGTGCAACTGATGACA
AGGGACCAGTACTTGGCTGGCTAAATGCCCTGGAAGCTTTTCAGCAAATAAATCAGGATATCCCTGTCAATGTCAAATTT
TGTCTAGAAGGCATGGAGGAATCTGGTTCTGAAGGACTGGATGACTTGATTTTCTCCAAGAAAGATACTTTCTTCAAAGA
TGTGGATTATGTTTGTATCTCTGACAACTACTGGCTGGGGAAAAAGAAGCCCTGTATTACGTATGGCCTCAGAGGAATTT
GCTATTTTTTTATAGAGGTGGAATGCTCCGACAAAGACCTTCGTTCTGGTGTGTATGGTGGTTCAGTGCATGAAGCCATG
TCAGATCTCATTACTCTGATGGGCTGCTTGGTGGACAGAACGGGACACATTCTCATCCCTGGTATTAATGAAGCAGTGGC
TCCTGTTACTGATGAGGAGCTCTTACAATATGAAAAGATTGACTTTGACTTGGAAGAATATGCAAAAGATGTAGGAGCAG
AGACACTTCTACATGATTCAAAGGAAAAAATCTTAATGCACAGATGGAGATATCCATCCCTGTCTCTCCATGGAATTGAA
GGAGCCTTCTCTGGAACAGGAGCTAAAACTGTGATTCCTAGGAAAGTGATTGGCAAATTCTCAATAAGATTGGTGCCAGA
TATGGTACCTGAGGTTGTTGAAAAACAGGTTATAAGTTACTTGAATACAAAGTTTGCTGAACTGAAGAGCCCCAACAAAT
TCAAAGCTTACATGGGCCATGGTGGAAAACCCTGGGTGTCCGACTTCAATCATCCTCATTACCTGGCTGGGAGAAAAGCC
CTAAAAAGAGTTTTTGGTGTTGAACCAGACTTGACCAGAGAAGGGGGCAGTATTCCTGTGACCTTGACCTTCCAAGAGGC
CACAGGTAAAAATGTAATGCTGCTGCCTGTCGGATCAGCAGATGATGGTGCTCATTCACAAAATGAAAAACTCAACAGGC
ATAACTACATAGAAGGGACCAAAATGCTGGGTGCATACCTTTATGAAGTGTCTCAACTGGACTGA
ORF - retro_meug_7 Open Reading Frame is conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
99.38 % |
Parental protein coverage: |
100. % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
0 |
Retrocopy - Parental Gene Alignment:
Parental | DIPVNVKFCLEGMEESGSEGLDDLIFSKKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVEC |
| DIPVNVKFCLEGMEESGSEGLDDLIFSKKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVEC |
Retrocopy | DIPVNVKFCLEGMEESGSEGLDDLIFSKKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVEC |
|
Parental | SDKDLHSGVYGGSVHEAMSDLITLMGCLVDRTGHILIPGINEAVAPVTDEELLQYEKIDFDLEEYAKDVG |
| SDKDL.SGVYGGSVHEAMSDLITLMGCLVDRTGHILIPGINEAVAPVTDEELLQYEKIDFDLEEYAKDVG |
Retrocopy | SDKDLRSGVYGGSVHEAMSDLITLMGCLVDRTGHILIPGINEAVAPVTDEELLQYEKIDFDLEEYAKDVG |
|
Parental | AETLLHDSKEKILMHRWRYPSLSLHGIEGAFSGTGAKTVIPRKVIGKFSIRLVPDMVPEVVEKQVISYLN |
| AETLLHDSKEKILMHRWRYPSLSLHGIEGAFSGTGAKTVIPRKVIGKFSIRLVPDMVPEVVEKQVISYLN |
Retrocopy | AETLLHDSKEKILMHRWRYPSLSLHGIEGAFSGTGAKTVIPRKVIGKFSIRLVPDMVPEVVEKQVISYLN |
|
Parental | TKFAELKSPNKFKAYMGHGGKPWVSDFNHPHYLAGRKALKRVFGVEPD-TREGGSIPVTLTFQEATGKNV |
| TKFAELKSPNKFKAYMGHGGKPWVSDFNHPHYLAGRKALKRVFGVEPD.TREGGSIPVTLTFQEATGKNV |
Retrocopy | TKFAELKSPNKFKAYMGHGGKPWVSDFNHPHYLAGRKALKRVFGVEPDLTREGGSIPVTLTFQEATGKNV |
|
Parental | MLLPVGSADDGAHSQNEKLNRHNYIEGTKMLGAYLYEVSQLD |
| MLLPVGSADDGAHSQNEKLNRHNYIEGTKMLGAYLYEVSQLD |
Retrocopy | MLLPVGSADDGAHSQNEKLNRHNYIEGTKMLGAYLYEVSQLD |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Macropus eugenii was not studied using RNA-Seq expression data.
Macropus eugenii was not studied using ChIP-Seq data.
1 EST(s) were mapped to retro_meug_7 retrocopy
EST ID |
Start |
End |
Identity |
Match |
Mis-match |
Score |
FY726257 |
585 |
1138 |
100 |
553 |
0 |
553 |
Macropus eugenii was not studied using FANTOM5 data.
retro_meug_7 was not experimentally validated.
Retrocopy orthology:
Macropus eugenii does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
1 parental gene, and
1 retrocopy.