RetrogeneDB ID: | retro_meug_714 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold166846:1266..1628(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MMD | ||
Ensembl ID: | ENSMEUG00000007054 | ||
Aliases: | None | ||
Description: | monocyte to macrophage differentiation-associated [Source:HGNC Symbol;Acc:7153] |
Percent Identity: | 57.72 % |
Parental protein coverage: | 51.26 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MRFKSRFQRFMNHRAPANSRYKPTCYEHAANCYTHALLIVPAIVGSALLHRLSDDCWEKITAWIYGMGLC |
M.FKS.FQ.FMN.R.PANS.YK.TC..HAANCYTH.LLI..A.VGSALLH.LSDDCWE...........C | |
Retrocopy | MQFKSLFQWFMNYRVPANSLYKSTC*GHAANCYTHVLLIKCAVVGSALLHQLSDDCWENHNMDL*NGPMC |
Parental | ALFIVSTVFHIVSWKKSHLRTMEHCFHMCDR-MVIYFFIAASYAPWLNLRELG |
.L.....V.H.....KSHLRTMEHCF....R.....F.IAA....WLNL.ELG | |
Retrocopy | PLHCFHSVLHCFMGEKSHLRTMEHCFYTIER<VIYFF-IAAYDPLWLNLHELG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000000205 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000013437 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000017248 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000007054 | 1 retrocopy |
retro_meug_714 ,
|
Myotis lucifugus | ENSMLUG00000012876 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000014847 | 5 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000010549 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000005902 | 2 retrocopies | |
Procavia capensis | ENSPCAG00000004969 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000016227 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000007915 | 1 retrocopy |