RetrogeneDB ID: | retro_meug_74 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_1464:15420..16452(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000006532 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.83 % |
Parental protein coverage: | 83.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LADQMLPLWRLNYEEQLKVKFESLKKNLETLEIRLRKIGAGDPEPTTARSERLCSLLHPFIPSPIIDGYR |
LAD...PLWRL.YE.QL.VK.E.L...LE.LE.RLR....G.P....A....LCS.L.PF.PSP.IDGYR | |
Retrocopy | LADLVTPLWRLDYEQQLRVKAETLRGLLERLEARLRSL--GSPD---AEAGSLCSRLQPFRPSPVIDGYR |
Parental | NKSSFSINQGPDGN-KTVGYYLKSW--SNIFCVQPSHLKDIXXXXXXXXXCFEAFLQQSRLG-HFDSCKV |
NK..F.I.QGPDG...TVGY.L.S.......CVQP.HLK.I.........C..AFL.QS.L......... | |
Retrocopy | NKCNFAIRQGPDGRPRTVGYVLGSRREQQLVCVQPGHLKHIPDKHQRVARCYQAFLEQSPLEPYLEPHGS |
Parental | GPWHELIVRTTFLGHTMAIIIFNPQELSQEELCVQKEEIKEFFSTGPGAVCDLTSLYVKESTRTPRHQQL |
G.WHEL.VR.T..GHTMAII.F.PQ.L....L....E..KEFF..GPGA.CDLTSLY..E.......QQ. | |
Retrocopy | GHWHELTVRSTGRGHTMAIIAFHPQQLRPDQLRPHQEQVKEFFTHGPGAACDLTSLYFQENVQGG--QQP |
Parental | TPFQLLAGEPYLFEEILGLKVRISPGAFFQLNTSAAEVLYRTVGELGGVDPNTVIFDFSHGTGATALSLA |
...QLLAGEP..FE...GLK.RISPGAFFQ.N..A.EVLYR.VGEL.GVDPNT...D.S.GTGAT.LSLA | |
Retrocopy | PRYQLLAGEPHIFEDLPGLKFRISPGAFFQINSAAVEVLYRVVGELSGVDPNTLLLDLSQGTGATSLSLA |
Parental | RQTSQIFSMGLVGQALEDAKWTAAFNGITNWESHTGNVKEILSQLLESQEDGRSLMALVDPSQCGLSNRV |
..T.Q..S.GLVGQA.EDA.WTAAFNGITNWE.H...V..I..QLL.SQE.G.SL.A.VDPS..GL...V | |
Retrocopy | QRTAQVLSTGLVGQAVEDARWTAAFNGITNWEFHADQVENIVPQLLKSQETGQSLVAMVDPSRTGLNSQV |
Parental | V |
V | |
Retrocopy | V |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000004570 | 1 retrocopy | |
Homo sapiens | ENSG00000188917 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000023759 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000006532 | 2 retrocopies |
retro_meug_1325, retro_meug_74 ,
|
Macaca mulatta | ENSMMUG00000010394 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000025630 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000007522 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000020545 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000023413 | 1 retrocopy |