>retro_meug_757
TCTCCCCAGATGGGCACCTTTTCCAAGTGGAATATGCAGGAAGTGGTGAAAAAGAGCTTGACTATGGTTGGTTTATCAGG
AAAAGATACTGTTGTTCTTGGTATAGACAAGAAATCAGTGGCCATACTACGAGATGGAAGGACTGTGCGGAAGATCTGTG
CTTTGGATGACATTGTCTGCATGGTTTTTGCAGGGTTCACTACCAATGCTAGAATAGTTATGAATAGGGTTCATGCAGAG
TGCCAGAGTCATTGGCTCACTGTAGAGGATCCTGTCACAGTGGAATATATCACCGCTTACTTCGCAAGTCTGAAGCAGCA
TTATACTCAGAGTAACAGATGAAGACCTTTGGGCATTTCTGCACTTATTGTGGGATTTGACTTTGATGGAACTCCCAGAC
TTTACCAGACAGAC
ORF - retro_meug_757 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
67.86 % |
Parental protein coverage: |
63.06 % |
Number of stop codons detected: |
1 |
Number of frameshifts detected |
0 |
Retrocopy - Parental Gene Alignment:
Parental | SPDGHLFQVEYAQEAVKKGSTAVGIRGTDIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAFAGLTA |
| SP....F.....QE.VKK..T.VG..G.D.VVLG..KKSVA.L.D.RTVRKICALDD.VCM.FA..G.T. |
Retrocopy | SPQMGTFSKWNMQEVVKKSLTMVGLSGKDTVVLGIDKKSVAILRDGRTVRKICALDDIVCMVFA--GFTT |
|
Parental | DARIVINQARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTD |
| .ARIV.N....ECQSH.LTVEDPVTVEYIT...A.LKQ.YTQSN..RP.GISALIVGFD.DG.PRLYQTD |
Retrocopy | NARIVMNRVHAECQSHWLTVEDPVTVEYITAYFASLKQHYTQSNR*RPLGISALIVGFDFDGTPRLYQTD |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Macropus eugenii was not studied using RNA-Seq expression data.
Macropus eugenii was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_meug_757 retrocopy.
Macropus eugenii was not studied using FANTOM5 data.
retro_meug_757 was not experimentally validated.
Retrocopy orthology:
Macropus eugenii does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
2 parental genes, and
2 retrocopies.