RetrogeneDB ID: | retro_meug_856 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold20929:4213..4593(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000005428 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CETN1 | ||
Ensembl ID: | ENSMEUG00000013823 | ||
Aliases: | None | ||
Description: | centrin, EF-hand protein, 1 [Source:HGNC Symbol;Acc:1866] |
Percent Identity: | 91.41 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KKMGPKPELTEEQKQEIREAFDL-DTDGTGTIDVKELKVAMRALGFEPKKEEIKKMIADIDKEGTGKISF |
KKMG.KPELTEEQKQEIREAFD..DTDGT.TIDVKELKVAMRALGF.PKKEEIKKMIADIDKEG.GKISF | |
Retrocopy | KKMGLKPELTEEQKQEIREAFDVFDTDGTRTIDVKELKVAMRALGFKPKKEEIKKMIADIDKEGIGKISF |
Parental | NDFLAVMTQKMAEKDTKEEILKAF-RLFDDDETGKISFKNLKRVARELGENLTDEELQ |
NDFLA.MTQKMAEKDTKEEILKA..RLF.DDETGKISFKNLK.VARELGENLTDEELQ | |
Retrocopy | NDFLAMMTQKMAEKDTKEEILKAV<RLFTDDETGKISFKNLKCVARELGENLTDEELQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000013823 | 2 retrocopies |
retro_meug_1093, retro_meug_856 ,
|
Monodelphis domestica | ENSMODG00000005932 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000015319 | 2 retrocopies |