RetrogeneDB ID: | retro_mluc_1363 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429827:577059..577573(-) | ||
Located in intron of: | ENSMLUG00000026898 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AASDHPPT | ||
Ensembl ID: | ENSMLUG00000016238 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.25 % |
Parental protein coverage: | 55.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | PGRGSISEFFHIMKRKFTNKEWETIKSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQRLEFDMSPL |
PG..S.SE....MK.KFTNKEWE...SFKDEWT.L.MFY....LKESFI.AI..GLGFE.Q.LE.DMSPL | |
Retrocopy | PGPASTSECLLSMKEKFTNKEWEVTRSFKDEWTRLHMFYGHRTLKESFIEAIVAGLGFESQWLECDMSPL |
Parental | NLDL-GQVYKETRLFLDGKEEKEWAFEESKIDEHH-FVAVALRKPDGSRHQ-DASSQDDSKPSQRQFTIL |
NL...GQVYKET.LFLDG...KEWAFEES..DEH..FVAVA..KPD.SRHQ.DASSQDD..P.......L | |
Retrocopy | NLEM<GQVYKETCLFLDGEDGKEWAFEESQTDEHY<FVAVAPGKPDASRHQ<DASSQDDPTPPEAG-PVL |
Parental | TY-NDLISSAVPMTPEDPSFWDCFC-FTEEILIRNGTTS |
.Y..DL.S.AVPM.P..PS.WDCF..F.EE.L..N.T.S | |
Retrocopy | PY<QDLVSPAVPMSPAQPSCWDCFS<FPEEVLMGNATKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000012279 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000004248 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000016238 | 4 retrocopies | |
Mus musculus | ENSMUSG00000025894 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000000231 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000000268 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000005102 | 1 retrocopy |