RetrogeneDB ID: | retro_mluc_1705 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429888:1155251..1155586(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RHOD | ||
Ensembl ID: | ENSMLUG00000011602 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 55.17 % |
Parental protein coverage: | 68.05 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | FDVTNPHSFENIFNRWYPEVNHFCKEVPIILVGCKTDLRKDRSLVKKLWKNKLEPVTYHRGQEMARSVGA |
.....P......FN.WY..V.HFCKEVPIIL.G.KT.L.KD.S.VKKL.K..LEPVTY.RGQEMA....A | |
Retrocopy | YSESKPPAHDCTFNQWYSKVTHFCKEVPIILTGWKTGLHKDKSQVKKLQKTGLEPVTYPRGQEMAKVMPA |
Parental | -VAYLECSARLQENVHAVFQEAVKVALSSRSRNYWRRITRSFCVLT |
...YL.CSARL.ENV...FQ....VA.SSRS.N...R....F.V.T | |
Retrocopy | <RGYLNCSARLRENV---FQ*VAEVAVSSRSSN*QQRVAWNFSVET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Myotis lucifugus | ENSMLUG00000004129 | 4 retrocopies | |
Myotis lucifugus | ENSMLUG00000011602 | 1 retrocopy |
retro_mluc_1705 ,
|
Myotis lucifugus | ENSMLUG00000013911 | 6 retrocopies |