RetrogeneDB ID: | retro_mluc_2097 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430031:59866..60367(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | WSB2 | ||
Ensembl ID: | ENSMLUG00000002114 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.07 % |
Parental protein coverage: | 74.22 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LEEQFIPKGFEAKSRSSKNDTKGRGSPKEKTLD-CGQIVWGLAFSPWPSPP-SRKLWARHHPPGPDASCL |
.EEQFIPKGFEAKS.SSKNDTKGRGSPKE..LD.CG.IVWGL.FS.WP.PP.SRKLWA.HH.P.P..SCL | |
Retrocopy | VEEQFIPKGFEAKS*SSKNDTKGRGSPKERILD>CGHIVWGLPFSLWPAPP<SRKLWACHHSPVPGVSCL |
Parental | ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS |
IL..GL.DGQI.IWEVQTG.LLL.LSGHQ.VVRDLSFTPSG.L.LVS.SR.KTLRIWDLNK.GKQIQVLS | |
Retrocopy | ILPMGLKDGQIQIWEVQTGILLLKLSGHQNVVRDLSFTPSGRLTLVSVSRNKTLRIWDLNKQGKQIQVLS |
Parental | GHLQWVYCCSISPDCSMLCSAAGEKSVSL |
GHLQWVYCCSIS.D.SML.SA.GEKSV.L | |
Retrocopy | GHLQWVYCCSISAD*SMLRSADGEKSVFL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000003651 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000018534 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000005913 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000002114 | 1 retrocopy |
retro_mluc_2097 ,
|
Macaca mulatta | ENSMMUG00000010236 | 1 retrocopy | |
Mus musculus | ENSMUSG00000029364 | 1 retrocopy |