RetrogeneDB ID: | retro_mluc_2334 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430221:362128..362850(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000026335 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDRG1 | ||
Ensembl ID: | ENSMLUG00000005686 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.63 % |
Parental protein coverage: | 61.17 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MYPSMDQLAEMLPGVLHQFGVKSVIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI |
MYPSMDQLAEMLPGVLHQFGVKSVIGMGTGAGAYI.TRFALNN.EMVEGLVLINVNPCAEGWMDWAASKI | |
Retrocopy | MYPSMDQLAEMLPGVLHQFGVKSVIGMGTGAGAYIFTRFALNNSEMVEGLVLINVNPCAEGWMDWAASKI |
Parental | SGWTQALPDMVVSHLFGKEEMQNNVEVVHTYRQHILNDMN-PGNLHLFINAYNSRRDLEIERPMPGVHTV |
SGWTQALPDMVVSHLFGKEEMQNNVEVVHTYRQHILNDMN.PGNLHLFINAYNSRRDLEIE.PMPGVH.V | |
Retrocopy | SGWTQALPDMVVSHLFGKEEMQNNVEVVHTYRQHILNDMN<PGNLHLFINAYNSRRDLEIEWPMPGVHRV |
Parental | TLQCPVLLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSAS |
TLQCPVLLVVGDSSPAVDAVVECNSKLDPTKTTLLKM.DCGGLPQISQPAKL.EAFKY.VQGMG.MPSAS | |
Retrocopy | TLQCPVLLVVGDSSPAVDAVVECNSKLDPTKTTLLKMGDCGGLPQISQPAKLSEAFKYSVQGMGCMPSAS |
Parental | MTRLMRSRTASGSSVTSLEGSRSRSHTSEGTR |
MTRLM.SRTASG.SVTSLEGS.SRSHTSEG.R | |
Retrocopy | MTRLMQSRTASGFSVTSLEGSHSRSHTSEGAR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000003003 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000005686 | 1 retrocopy |
retro_mluc_2334 ,
|
Myotis lucifugus | ENSMLUG00000009735 | 1 retrocopy |