>retro_mluc_287
ATGCTGCGCGTGGTGAGCTGGAACATTAATGGGATCCGGAGCCCTCTGCAAGCGGAGGAGCCGAACAACTGTACCACCAT
GGCCATGGCGCCCGTTTTGGACAAGCTGGATGCTGACATCCTCTGTCTTCAGGAGACTAAAGTTACCAGGGATGCACTGA
CAGAGCCCCTGGCTATTGTTGAGGGCTACAACTCCTATTTCAGCTTCAGCCGCAACCGGAGTGGCTATTCCGGTGTAGCC
ACCTTCTGTAAGGACTGCGCCGCCCCAGTGGCTGCTGAAGAAGGCCTGAGTGGCCTCCTTGCCCCTCAGAATGGGGATGT
GGGTTGCTATGGAAACATGGATGAGTTCAGCCAAGAGGAGCTTCGGGCTCTGGATAATGAGGGCCGGGCCCTCCTCACTC
AGCACAAGATCCGCACCCGGGATGGTAAGGGGAAGATCTTGACCATAATCAACGTGTATTGCCCCCACGCTGACCCTGGG
AGGCCTGAGCGGCTGACCTTTAAGATGCGCTTCTATCACTTGCTGCAGATCCGAGCAGAAGCCCTCCTGGCAGCTGGCAG
CCATGTGATCATTCTAGGTGACTTGAATACAGCGCACCGCCCCATTGACCATTGGGATGCAGTCAGCCTGGAAGGCTTTG
AAGAGGACCCAGGACGCAGGTGGATGGACGGCCTGCTCAGTAAGCTGGATTACCAGGGTGGGTCCCACGTAGGGGCTTTT
ATTGATACCTACCGCTGCTTCCATCCAAAGCAGGAGAGGGCCTTTACCTGCTGGTCAACAATCACTGGCACCCGCCGTCT
GAACTATGGCTCCCGGATTGACTATGTGCTGGGAGACAGGACTCTGGTTATAGACACCTTCCAGGACTCCTTCCTGCTGC
CTGAGGTGATGGGCTCTGACCATTGCCCCGTGGGTGCAGTCTTGAGCGTGTCTTCTGTGCCGGCAAAACAATGCCCTCCT
CTTTGCACCCGCTTCCTCCCTGAGTTTTCAGGCACCCAGCTCAAGATCCTTCATTTCCTAGTCCATCCCAAACAAGAGCC
TGTGTCCAAGCAGTCAGTGCTGCAGCTCAGCAATCAAACCCAGGGACAGATGCGCCAAAACAAAGCCCATGTGCGCGTGA
TCAGGCTTCGGCCAAGTCGGGCTGGCTCCAGCAAAGGCCAAAAAAAACTGATTAACTACTTCCGGCCATCCTCCAGCCGT
CTCCAAGCTTCTACCAATTTGGAACTTCCTAACCTGCGTGCCCTTGTGACTCCAAAGATCCCAGAAGACGAGGTGATGGG
CAAAGGGGTAGAGGGGCAGGCCAAGGATGAGAAGGAGCTACGGACCTCATTCTGGAAGTCTGTGCTGGGGGGTCCCTTGC
CCATGCCGCTCTGTGGGGGCAATGGGGAGCCATGTGTGATGCGAACGGTGAAGAAGGCAGGACCCAACCAGGGCCGTCAC
TTCTACATGTGTTCCAGGCCCCGGGGGCCTTCCACTGACCCCTCTTCTTGCTGCAACTTCTTCCTCTGGAGCAGGCCCAG
CTGA
ORF - retro_mluc_287 Open Reading Frame is conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
95.41 % |
Parental protein coverage: |
85.16 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
0 |
Retrocopy - Parental Gene Alignment:
Parental | MLRVVSWNINGIRSPLQAEEPNSCTTMAMARVLDKLDADILCLQETKVTRDALTEPLAIIEGYNSYFSFS |
| MLRVVSWNINGIRSPLQAEEPN.CTTMAMA.VLDKLDADILCLQETKVTRDALTEPLAI.EGYNSYFSFS |
Retrocopy | MLRVVSWNINGIRSPLQAEEPNNCTTMAMAPVLDKLDADILCLQETKVTRDALTEPLAIVEGYNSYFSFS |
|
Parental | RNRSGYSGVATFCKDGATPVAAEEGLSGLLAPQNGDVGCYGNMDEFSQEELRALDNEGRALLTQHKIRTW |
| RNRSGYSGVATFCKD.A.PVAAEEGLSGLLAPQNGDVGCYGNMDEFSQEELRALDNEGRALLTQHKIRT. |
Retrocopy | RNRSGYSGVATFCKDCAAPVAAEEGLSGLLAPQNGDVGCYGNMDEFSQEELRALDNEGRALLTQHKIRTR |
|
Parental | DGKEKILTIINVYCPHADPGRPERLTFKMRFYRLLQIRAEALLAAGSHVIILGDLNTAHRPIDHWDAVNL |
| DGK.KILTIINVYCPHADPGRPERLTFKMRFY.LLQIRAEALLAAGSHVIILGDLNTAHRPIDHWDAV.L |
Retrocopy | DGKGKILTIINVYCPHADPGRPERLTFKMRFYHLLQIRAEALLAAGSHVIILGDLNTAHRPIDHWDAVSL |
|
Parental | ECFEEDPGRKWMDGLLSKLDCQGGSNVGAFIDTYRCFHPKQERAFTCWSTITGARRLNYGSRIDYVLGDR |
| E.FEEDPGR.WMDGLLSKLD.QGGS.VGAFIDTYRCFHPKQERAFTCWSTITG.RRLNYGSRIDYVLGDR |
Retrocopy | EGFEEDPGRRWMDGLLSKLDYQGGSHVGAFIDTYRCFHPKQERAFTCWSTITGTRRLNYGSRIDYVLGDR |
|
Parental | TLVIDTFQDSFLLPEVMGSDHCPVGAVLNVSSVPAKQCPPLCTRFLPEFSGTQLKILHFLVHPKQEPVSK |
| TLVIDTFQDSFLLPEVMGSDHCPVGAVL.VSSVPAKQCPPLCTRFLPEFSGTQLKILHFLVHPKQEPVSK |
Retrocopy | TLVIDTFQDSFLLPEVMGSDHCPVGAVLSVSSVPAKQCPPLCTRFLPEFSGTQLKILHFLVHPKQEPVSK |
|
Parental | QSVLQLSNQTQGQMRQNKAHVRSIRPRPSRAGSGKGQKKLINYFQPSSSRLQASTNLELPNLRALVTPKI |
| QSVLQLSNQTQGQMRQNKAHVR.IR.RPSRAGS.KGQKKLINYF.PSSSRLQASTNLELPNLRALVTPKI |
Retrocopy | QSVLQLSNQTQGQMRQNKAHVRVIRLRPSRAGSSKGQKKLINYFRPSSSRLQASTNLELPNLRALVTPKI |
|
Parental | PEDKVMGKGVEGQAKD |
| PED.VMGKGVEGQAKD |
Retrocopy | PEDEVMGKGVEGQAKD |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Myotis lucifugus was not studied using RNA-Seq expression data.
Myotis lucifugus was not studied using ChIP-Seq data.
Myotis lucifugus was not studied using EST data.
Myotis lucifugus was not studied using FANTOM5 data.
retro_mluc_287 was not experimentally validated.
Retrocopy orthology:
Myotis lucifugus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
4 parental genes, and
4 retrocopies.