RetrogeneDB ID: | retro_mluc_484 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | AAPE02069841:6264..6539(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SARNP | ||
Ensembl ID: | ENSMLUG00000003565 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.4 % |
Parental protein coverage: | 55.09 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | DLINRLQAYLEEHAEEEANEED-VLGDETEEEEPKPIELPVKEEEPPEK-TVDVAAEKKVVKITSEIPQT |
DLIN.LQAYLEEHA.EE...E.........EEEPKPIELPVKE.E.PEK.T.DVAAEKKVV.I..EI.QT | |
Retrocopy | DLINGLQAYLEEHA-EEEANEE>MNWEMKQEEEPKPIELPVKEDEAPEK>TIDVAAEKKVVIIIFEIAQT |
Parental | ERMQKRAERFNVPVSLESKKAARA |
ERMQKRAE.FNVPVSLE.KKAA.A | |
Retrocopy | ERMQKRAEGFNVPVSLETKKAAGA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000011769 | 2 retrocopies | |
Bos taurus | ENSBTAG00000020662 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000005081 | 5 retrocopies | |
Cavia porcellus | ENSCPOG00000011755 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000015176 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000015053 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000003565 | 2 retrocopies |
retro_mluc_1915, retro_mluc_484 ,
|
Monodelphis domestica | ENSMODG00000028949 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000000885 | 1 retrocopy | |
Mus musculus | ENSMUSG00000078427 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000001693 | 3 retrocopies | |
Procavia capensis | ENSPCAG00000009477 | 2 retrocopies |