>retro_mluc_840
CTGTGGATCAGCTCTCTTCCAATTACTGACGTGGACATCAAGTTTCAGTACCGTGGGAAGGAGTATGTGCAGACCTTGAC
CGTGAGCAACCCCCAGGGCTGCCGGCTCTTCTATAGGGATCTGGGTCCCATGCCTGACCAGGAGGAGCTCTTGGGTCCTG
TCAGTCTGGAGCAGGTCAAGTTCCCAGGTCCGGAGCACATCACCAATGAGAAGCAGAAGCTGTTCACCAGCAAGCTGCTA
GACGTCATGGACAGAGGACTGATCCTGAAGGTCAGCGGTCACGCCATTTATGCCATCAGGCTGTGCCAGTGCAAGGTGTA
CTGGTCGGGGCCATGTGCCCCATCACTTGTTGCTCCCAACCTGATTGAGAAGCAAAAGAAGGTCAAACTCTTTTGTCTGG
AAACATTCCTTAGTGATCTCATTGCCCACCAGAAAGGACAGATAGAGAAGTAGCCGCCATTTGAGATCTACTTATGCTTT
GGAGAAGAATGGCCAGACGGGAAACCCCCGGAAAGGAAACTCATCTTGGTTCAGGTTATTCCGGTGGTGGCTCGAATGAT
CTACGAGATGTTTACTGGTGATTTCACACGATGCTTTGACAGTGGCAGTGTCCGCCTGCAGATCTCGACTCCAGACAGCA
AAGATAACATCGTTGCTCAGCTGAAGCAGCTGTATCGCATCCTCCAAACCCAGGAAAGCTGGCAGCCCATGCAGTCTACC
CCCACATGCAGCTGCCTCCGGCTCTGCCGGCTCAG
ORF - retro_mluc_840 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
94.86 % |
Parental protein coverage: |
56. % |
Number of stop codons detected: |
1 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | LWISSLPMTDLDIKFQYRGKEYVQTLTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNE |
| LWISSLP.TD.DIKFQYRGKEYVQTLTVSNPQGCRLFY.DLGPMPDQEEL.GPVSLEQVKFPGPEHITNE |
Retrocopy | LWISSLPITDVDIKFQYRGKEYVQTLTVSNPQGCRLFYRDLGPMPDQEELLGPVSLEQVKFPGPEHITNE |
|
Parental | KQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSEL |
| KQKLFTSKLLDVMDRGLIL.VSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIE.QKKVKLFCLETFLS.L |
Retrocopy | KQKLFTSKLLDVMDRGLILKVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIEKQKKVKLFCLETFLSDL |
|
Parental | IAHQKGQIEKQPPFEIYLCFGEEWPDGKPPERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQIST |
| IAHQKGQIEK.PPFEIYLCFGEEWPDGKPPERKLILVQVIPVVARMIYEMF.GDFTR.FDSGSVRLQIST |
Retrocopy | IAHQKGQIEK*PPFEIYLCFGEEWPDGKPPERKLILVQVIPVVARMIYEMFTGDFTRCFDSGSVRLQIST |
|
Parental | PDIKDNIVAQLKQLYRILQTQESWQPMQST-PNMQLPPALPAQ |
| PD.KDNIVAQLKQLYRILQTQESWQPMQST.P.MQLPPALPAQ |
Retrocopy | PDSKDNIVAQLKQLYRILQTQESWQPMQST<PHMQLPPALPAQ |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Myotis lucifugus was not studied using RNA-Seq expression data.
Myotis lucifugus was not studied using ChIP-Seq data.
Myotis lucifugus was not studied using EST data.
Myotis lucifugus was not studied using FANTOM5 data.
retro_mluc_840 was not experimentally validated.
Retrocopy orthology:
Myotis lucifugus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
1 parental gene, and
2 retrocopies.