>retro_mputfur_1437
GCTTCGGAGGCTTCGGGGTCTTTGCAGTTTGAGAAAGAGGACCCCGATCCTCTCCTTCCTCAGGTTTTAAGAAGCTGGCC
TTGGTGCAGTAAGGAGCTTAGAACAATGGAGGAACGGAAAGTGAAGAGGAGGAGTCCTAAGTCTTTTAGTGTCCACTCTA
CTCAGGTGGTTAATGCCCCAAAAAAATACCATTCCAGTTAGTAAAAGCACAGGGTTTTCAAATCCTGCATCACAGTCAAC
TTCACAGCGACCAAAGTTAAAAAGAGTGATGAAAGAAAAGACCAGACCTCAGGGTGGAGAAGGAAAATGTGCACAACCGA
CTCCTATTCAGCACTCCTTCCTCACCGACGTCTCAGACGTTCAGGAGATGGAGAGAGGGCTTCTCAGCCTTTTGAATGAT
TTCCACTCTGGAAAACTTCAAGCATTCGGAAATGAATGTTCCATTGAACAGATGGAACATGTTCGGGGAATGCAGGAGAA
ATTAGCTCGCTTGAATTTGGAGCTCTATGGGGAGTTAGAGGAACTTCCTGAGGATAAGAGAAAAACAGCCAGTGACTCCA
ATCTGGACAGGCTTCTGTCTGACTTAGAAGAACTGAATTCTTCCATACAAAAGCTACATTTGTCTGATGCACAAGATGTT
CCAAATACTTCCACCAGC
ORF - retro_mputfur_1437 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
97.27 % |
Parental protein coverage: |
79.93 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | ASEASGSLQFEKEDPDPLLPQVLRSWPWCSKELRTMEERKVKRRSPKSFSAHSTQVVNA-KKNAIPVSKS |
| ASEASGSLQFEKEDPDPLLPQVLRSWPWCSKELRTMEERKVKRRSPKSFS.HSTQVVNA..KN.IPVSKS |
Retrocopy | ASEASGSLQFEKEDPDPLLPQVLRSWPWCSKELRTMEERKVKRRSPKSFSVHSTQVVNA>QKNTIPVSKS |
|
Parental | TGFSNPASQSTSQRPKLKRVMKEKTRPQGGEGKGAQPTPIQHSFLTDVSDVQEMERGLLSLLNDFHSGKL |
| TGFSNPASQSTSQRPKLKRVMKEKTRPQGGEGK.AQPTPIQHSFLTDVSDVQEMERGLLSLLNDFHSGKL |
Retrocopy | TGFSNPASQSTSQRPKLKRVMKEKTRPQGGEGKCAQPTPIQHSFLTDVSDVQEMERGLLSLLNDFHSGKL |
|
Parental | QAFGNECSIEQMEHVRGMQEKLARLNLELYGELEELPEDKRKTASDSNLDRLLSDLEELNSSIQKLHLAD |
| QAFGNECSIEQMEHVRGMQEKLARLNLELYGELEELPEDKRKTASDSNLDRLLSDLEELNSSIQKLHL.D |
Retrocopy | QAFGNECSIEQMEHVRGMQEKLARLNLELYGELEELPEDKRKTASDSNLDRLLSDLEELNSSIQKLHLSD |
|
Parental | AQDVPNTSTS |
| AQDVPNTSTS |
Retrocopy | AQDVPNTSTS |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Mustela putorius furo was not studied using RNA-Seq expression data.
Mustela putorius furo was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_mputfur_1437 retrocopy.
Mustela putorius furo was not studied using FANTOM5 data.
retro_mputfur_1437 was not experimentally validated.
Retrocopy orthology:
Mustela putorius furo does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
3 parental genes, and
3 retrocopies.