>retro_mputfur_775
AGTGATAGCAATCCATATTCTTCATTTGGAGCAACTCTGGTGAGAGACGATGACAAGAATTTGTAGAGCATGCCCCTGTC
CCACACAGAGGCAGATGACGACAGAATCTTGTACAATCTGATAGTCGTTCGAAATCAGCAGGCCAAAGATTCAGAGGAGT
GGCAAAAACTCAACTACGATATCTACACCCTGCAGCAGATCCGGAGGGAAGTGAGAAATAGATGGAAACGCATCTTAGAG
GATTTAGGTTTTCAAAAGGAAGCTGACTCTTTGTTGTCCATGACGAAACTCAGCACCATTAGTGATTCTAAAAACACAAG
GAAGGCTCGGGAGATATTGTTAAAACTGGCTGAAGAAACCAGTATTTTTCCAAGCTGGGAGCTCTCGGAGAGATACCTCT
TTGTTGTGAACCGTCTCATTGCTCTCCATGCAGCAGAAGAGTTCTTTAAAATCGCCAGTGGAACTTACCCCAAGAAGCCA
GGAGTCCCAAGCCTGGCCAGAAAGAACTGCACTACCTTCCGTTTCCAAGTCCC
ORF - retro_mputfur_775 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
89.13 % |
Parental protein coverage: |
100. % |
Number of stop codons detected: |
1 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | SDSNPYSSFGATLARDDDKNLWSMPHDLSHTEADDDRILYNLIVVRNQQAKDSEEWQKLNYDIYTLRQIR |
| SDSNPYSSFGATL.RDDDKNL.SMP..LSHTEADDDRILYNLIVVRNQQAKDSEEWQKLNYDIYTL.QIR |
Retrocopy | SDSNPYSSFGATLVRDDDKNL*SMP--LSHTEADDDRILYNLIVVRNQQAKDSEEWQKLNYDIYTLQQIR |
|
Parental | REVRNRWKRILEDLGFQKEADSLLSVTKLSTISDSKNTRKAREILLKLAEETSIFPTSWELSERYLFVVD |
| REVRNRWKRILEDLGFQKEADSLLS.TKLSTISDSKNTRKAREILLKLAEETSIFP.SWELSERYLFVV. |
Retrocopy | REVRNRWKRILEDLGFQKEADSLLSMTKLSTISDSKNTRKAREILLKLAEETSIFP-SWELSERYLFVVN |
|
Parental | RLIALDAAEEFFKIASRTY-PKKPGVPSLADGQKELHYLPFPSP |
| RLIAL.AAEEFFKIAS.TY.P.....P....GQKELHYLPFPSP |
Retrocopy | RLIALHAAEEFFKIASGTY<PQEARSPK--PGQKELHYLPFPSP |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Mustela putorius furo was not studied using RNA-Seq expression data.
Mustela putorius furo was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_mputfur_775 retrocopy.
Mustela putorius furo was not studied using FANTOM5 data.
retro_mputfur_775 was not experimentally validated.
Retrocopy orthology:
Mustela putorius furo does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
2 parental genes, and
2 retrocopies.