RetrogeneDB ID: | retro_mputfur_996 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896988.1:1802774..1803296(+) | ||
Located in intron of: | ENSMPUG00000016715 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | STX8 | ||
Ensembl ID: | ENSMPUG00000007815 | ||
Aliases: | None | ||
Description: | syntaxin 8 [Source:HGNC Symbol;Acc:11443] |
Percent Identity: | 94.83 % |
Parental protein coverage: | 85.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | FSTYDSTCQIAQEIAEKIQQQNQYERNGENTIRLTVTIRTLLQNLKDKIALLKDLLLRAVSTHQITQLEG |
FSTYDSTCQIAQEIAEKIQQQNQYER.GENTIRL.VTIRTLLQNLKDKIALLKDLLLRAVSTHQITQLEG | |
Retrocopy | FSTYDSTCQIAQEIAEKIQQQNQYERTGENTIRLPVTIRTLLQNLKDKIALLKDLLLRAVSTHQITQLEG |
Parental | DRRQNLLDELVTRERLLVASFKNEGAEPDLIRSSLMTGGAKRGVPNPWLFEEPEETRGLGFDELRQQQQK |
DRRQNLLDEL.T.ERLLVASFKNEG.EPDLIRSSLMTGGAK.GVPNPWLFEEPEETRGLGFDEL.QQ.QK | |
Retrocopy | DRRQNLLDELLTPERLLVASFKNEGTEPDLIRSSLMTGGAKQGVPNPWLFEEPEETRGLGFDELQQQ*QK |
Parental | IIQEQDAGLDALSSIISRQKQMGKEIGNELDEQN |
IIQEQDAGLDALSSIIS.QKQMGKEIGNELDEQN | |
Retrocopy | IIQEQDAGLDALSSIISQQKQMGKEIGNELDEQN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000002045 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000017413 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000002114 | 1 retrocopy | |
Felis catus | ENSFCAG00000008276 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000008612 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000007815 | 2 retrocopies |
retro_mputfur_975, retro_mputfur_996 ,
|
Pteropus vampyrus | ENSPVAG00000001001 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000003849 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000010795 | 1 retrocopy |