RetrogeneDB ID: | retro_pvam_96 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_1334:64185..64651(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DRAM2 | ||
Ensembl ID: | ENSPVAG00000005429 | ||
Aliases: | None | ||
Description: | DNA-damage regulated autophagy modulator 2 [Source:HGNC Symbol;Acc:28769] |
Percent Identity: | 75.64 % |
Parental protein coverage: | 58.27 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | VLCVATIYVRYKQVHALNPERNCIIRLNKAGLVLGLLSCLGLSLVANFQKTTFFVVHVCGAVLTFGMGSL |
VLC.ATIYV.YKQVHALNPE..CI.RLNK.GLVLGLLS.L..S.VANFQK..F..VHVCG.VLTFG.GS. | |
Retrocopy | VLCTATIYVCYKQVHALNPEGSCITRLNKDGLVLGLLSGL*HSTVANFQKIIFVIVHVCGVVLTFGVGSS |
Parental | YMFVQTILSYQMQPKIHGKQVFWIRLLVVIWCGVSAFS-MLTCSSLLYSGSFGTDIVQKLHWNPKDKGYV |
YMFV.TILSYQ.QPK.HG....WIRLLVVIW.GVSA.S..LT.SSLL.SGSFGTD.VQKLHWNP..KGY. | |
Retrocopy | YMFV*TILSYQTQPKMHGTRILWIRLLVVIWSGVSALS>LLTHSSLLHSGSFGTDVVQKLHWNPENKGYG |
Parental | LHMITTAAEWSMSFSF |
L..ITTAAEWS.S.SF | |
Retrocopy | LRIITTAAEWSRSSSF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000017009 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000007736 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000005097 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000004232 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000005429 | 2 retrocopies |
retro_pvam_1424, retro_pvam_96 ,
|