RetrogeneDB ID: | retro_shar_514 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849743.1:296105..296484(+) | ||
Located in intron of: | ENSSHAG00000005747 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNTTIP1 | ||
Ensembl ID: | ENSSHAG00000002289 | ||
Aliases: | None | ||
Description: | deoxynucleotidyltransferase, terminal, interacting protein 1 [Source:HGNC Symbol;Acc:16160] |
Percent Identity: | 75.59 % |
Parental protein coverage: | 52.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | FFQKAAFNVRDNVGEDVDAEQLIQEACRSCLEQAKLLFSDGEKVIPRLTHELPGMKRGRQADEECAH-RG |
FFQKAAFNVRDN.GE.VDAEQLI.EACRSCLEQ.KLL...GEKVI.R.THELPGM..GRQA.E.C...RG | |
Retrocopy | FFQKAAFNVRDNDGEGVDAEQLIREACRSCLEQVKLLLLEGEKVISRPTHELPGMNHGRQAKEGCSP>RG |
Parental | SPIPKKRKGRPPGHILSNDRSTSGMVWKPKSCEPIRREGPKWDPARLNESTTFVLGS |
SP.P.KRKG.PPGHIL.NDR.TS.MV..PKS..P..REGPKWDPA.LNESTTFV.G. | |
Retrocopy | SPFPEKRKGWPPGHILPNDRLTSNMV*NPKSWGPVQREGPKWDPAQLNESTTFVPGA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Mus musculus | ENSMUSG00000017299 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000000368 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000002289 | 1 retrocopy |
retro_shar_514 ,
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