RetrogeneDB ID: | retro_shar_517 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849750.1:707261..707596(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TSTD1 | ||
Ensembl ID: | ENSSHAG00000016118 | ||
Aliases: | None | ||
Description: | thiosulfate sulfurtransferase (rhodanese)-like domain containing 1 [Source:HGNC Symbol;Acc:35410] |
Percent Identity: | 80.53 % |
Parental protein coverage: | 96.55 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | APAMSLPELRSILATDRDRVR-LIDVRSREESAAGTIPGALNIPVSELENALRMEPADFQATYFAEKPRP |
A.A..LPELRSILAT..D.V...IDV.S.EES..GTIPGALNI..S.LEN.L.MEPAD.QATYFA.KPRP | |
Retrocopy | ALAI*LPELRSILATYWDWVQ<VIDVSSWEESVTGTIPGALNILIS*LENVLCMEPADSQATYFAKKPRP |
Parental | EEENLVFFCQIGSNECHAMQTARELEYLGANYEDNYRAWQAKE |
EEENLVF.CQ.GSNECHAMQTARELEYLGANYEDNYRAWQAKE | |
Retrocopy | EEENLVFLCQTGSNECHAMQTARELEYLGANYEDNYRAWQAKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Equus caballus | ENSECAG00000000506 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000016118 | 1 retrocopy |
retro_shar_517 ,
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