RetrogeneDB ID: retro_taes_77

Retrocopy location

• Organism: Wheat (Triticum aestivum)
• Coordinates: 4A:196524559..196530328(-)
• Located in intron of: None

Retrocopy information

• Ensembl ID: Traes_4AL_FAA4B77C8
• Aliases: None
• Status: KNOWN_PROTEIN_CODING

Parental gene information

• Parental gene symbol: None
• Ensembl ID: Traes_3AL_340F1516D
• Aliases: None
• Description: None

Sequence

>retro_taes_77
ATGGAAACGGGTGAATACTATTTCCTGGAGCTTAATCCAAGATTGCAGGTAGAACACCCTGTGACCGAATGGATTGCTGG
AGTGAACCTACCTGCATCTCAAGTTGCGGTAGGAATGGGCATACCCCTCTACAACATTCCAGAGATCAGACGCTTTTATG
GACTGGAACATGGAGGTGGCTATCACAGCTGGAAGGAAATATCAGCTGTTGCGGCTAAATTTGACTTGGACAAAGCACAG
TCTGTAAGGCCAACGGGTCACTGTGTAGCAGTTCGAGTTACTAGCGAGGATCCAGATGACGGGTTTAAGCCTACTGGTGG
AAGAGTGGAGGAGCTAAACTTTAAAAGTAAACCCAATGCTTGGGCCTATTTCTCAGTTAAGTCTGGCGGAGCAATTCATG
AGTTTTCTGATTCTCAGTTTGGTCATGTTTTTGCTTTTGGGGAATCCAGGTCGTTGGCAATAGCCAATATGGTACTTGGG
TTAAAAGAGATCCAGATTCGTGGAGAGATACGCACCAATGTTGATTACACGGTCGATCTCTTGAATGCCGCGGAATACCG
AGAAAATAAGATCCACACTGGTTGGCTAGACAGCAGAATAGCTATGCGTGTCAGAGCAGAGAGGCCACCATGGTACCTTT
CAGTTGTTGCTGGAGCTCTATATGAAGCATCAAGCAGGAGCTCAAGTGTTGTAACCGATTATGTCGGTTATCTCAGTAAA
GGTCAAATACCACCAAGGCACATCTCTCTTGTCAATTTGACTGTAACACTAAATATAGAGGGGATCAAATATACAGTTAA
GACAGTAAGAGGTGGACCTGGTAGCTACAAATTAAGAATCAATGAATCAGAGATTGAAGCAGAGATGCACTCGTTGCGTG
ATGGTGGGCTCTTAATGCAGTTGGATGGAAACAGTCATGTAATTTACGCAGAGACAGAGGGTGCTGGTACACGCCTTCTA
ATCAATGGTAGAACCTGCTTATTACAGAAAGAGCATGATCCTTCCAAGCTGTTGGCTGATACACCGTGCAAACTTCTTCG
GTTTTTGGTCGCCGATGGTTCTCATGTGGTTTCTGATACACCATATGCTGAGGTGGAGGTCATGAAGATGTGCATGCCAC
TGTTACTACCGGCCTCTGGTGTCATTCACTTTGTCATGCCTGAGGGTCAGGCCATGCAGGCGAGTGACCTGATAGCAAGG
TTGGATCTTGATGACCCATCTTCTGTGAGGAAAGCTGAACCATTTCATGGCACCTTCCCAAAGCTTGGACCTTCTGCTGC
TATTTCTGGCAAAGTTCACCAAAAGTTTGCTGCAAGTGTGAATTCTGCGCACATGATCCTTGCAGGATATGAACATAATA
TCAGTCATGTTGTACAATATTTGCTAAACTGCCTAGACAGCCCTGAGCTCCCTTTTCTTCGGTGGCAAGAACTCATGTCC
GTTTTGGCAACACGACTCCCAAAAGATCTTAGGAATGAGTTGGATGGTGTGTACAAGGAGTATGAGTTGAATGCTGACTT
CCGGAAGGGCCAGGATTTCCCTGCCAAGTTGTTAAGGGAAGTCATTGAGGCAAATCTTGCACACTGTTCTGAGAAAGATA
GGATTACCAGTGAGAGGCTTATAGAGCCACTTATGAGCCTGGTCAAGTCATATGAGGGTGGAAGAGAAAGCCATGCTTGC
GTTGTTGTCAAGTCTCTCTTTGAGGAGTATTTATCTGTTGAAGAACTGTTCAGTGATGACATTCAGTCTGATGTGATAGA
ACGTCTACGACTTCAACATGCAAAAGACCTTGAGAAGGTTGTCTATATTGTGTTCTCCCATCAGGGTGTGAAAAATAAAA
ATGAGTTGATACTACAGCTTATGGACGGATTGGTCTACGCAAATCCATCTGCTTACAGGGACCAGTTGATTCGCTTTTCT
GCTCTGAACCATACAGCATACTCTGGGCTGGCACTTAAAGCAAGCCAACTTCTTGAGCAAACTAAATTGAGTGAACTCCG
CACAAGCATAGCAAGAAGCCTTTCAGAGCTGGAGATGTTTACTGAGGAAGGAGAGCAGGTTTCTACACCTAGGAGGAAGA
TGGCCATCAATGAAAGGATGGAAGATTTAGTGTGTGCCCCACATGCAGTTGAAGACGCCCTTGTGGCTTTGTTTGATCAC
AGTGATCCTACTCTTCAGCGGAGAGTAGTCGAGACATACATACGAAGATTGTATCAGCATTACCTTGTAAGGGGTAGTGT
CCGGATACAATGGCACAGGTCTGGCCTAATTGCATTATGGGAATTCTCTGAAGAGCATATTGGGCAGTCTGCAGCACTTC
TAAAGCAACAAGTACAGGATCCCAGGGGCAGGCGATGGGGTGTAATGGTTGTAATCAAGTCTCTTCAGTGTCTGTCAACT
GCGATTGAAGCTGCATTAAAGGAGACTTCGCATTACAGAGCAGGTGCTGGAAGTGTCTCAAATGGTAATCCTATAAATTC
TAACCGTGGCAATATTCTGCACATTGCTTTGGTTGGTATCAGCAATCAGATGGGCACTCTTCAAGACAGTGGTGATGAGG
ATCAAGCTCAAGAAAGGATTAACAAACTTTCCAAGATTCTGAAGGATACGACTATAACATCACATCTCAATGGTGCTGGT
GTTAGGGTTGTCAGCTGCATTATCCAAAGAGATGAAGGGCGTCCGCCAATGCGCCACTCCTTCCAATGGTCATTTGACAA
GCTATATTATGAGGAGGACCCGATGCTCCGTCATGTGGAACCTCCTTTGTCCACATTTCTTGAATTGGACAAAGTGCATC
TAGAAGGTTACAGTGACGCAAAATACACCCCATCTCGTGATCGCCAGTGGCACATCTACACACTGGTAAAGAACAATAAA
GATCCGAGATCAAATGACCAAAGGATGTTTCTTCGTACCATAGTCAGACAGCCAAGTATGACCAATGGTTTTTCGTTTGG
ACATATTGACAATGAGGTATGCCGTGCTCAAGCCTCATCGTCATTCATATCTAACAGCATACTCAGATCATTGATGGCAG
CGCTAGAGGAAATAGAGTTACATGCTCACAATGAGGCTGTGAGGTCAGCACACTCCCATATGTATATGTGCATACTGAGA
GAGCAGCTGTTGTTTGATCTAATTCCAGTTTCAACGAGGATGGATGAAGTTGGCCAAGATGAGGAGACAGCATGCACACT
TTTGAAGCATATGGCTATGAGTATACATGAACATGTCGGTGTTAGGATGCATCGACTTTCCGTGTGCCAGTGGGAAGTGA
AGCTATGGTTAGATTGTGATGGGCAAGCTAGTGGTGCTTGGAGAGTTGTTGTTACCATTGTCACTGGGCATTCCTGCACT
GTTGATATTTACCGAGAAGTGGAGGACTCCAATACACATGAGCTTTTCTACCGCTCCGCCACACCCGCAGCTGGTCCTTT
GCATGGCATTCCATTGCATGAGCCATACAAACCTTTGGATGCCCTTGACCAGAAACGTAACACTGCTAGGAAAAATGAAA
CTACATACTGCTATGATTTCCCATTGGTATTTGAAAAAGCATTGAAGGAGTCCTGGAAATCTGGTATTTCACATGTTGCA
GAAGCTAACGGGCACAATCAGCGGTATGCTCAAGTGACAGAGCTCATGTTTGCTGATTCAACTGGATCATGGGGTACTCC
TTTGGTTCCAGTTGAGCGTCCTCCAGGTATGAATGATATTGGAACTGTTGCTTGGAACATGAAGCTGTCCACACCAGAAT
TTCCAGACGGCCGGGAGATTATAGTTGTTGCAAATGACGTGACATTTAAAGCTGGTTCTTTTGGTCCTAGAGAAGATGCA
TTCTTCGATGCTGTTACCAATCTTGCTTGTGAGAGGAAAATTCCTCTAATCTACTTGGCAGCAACTTCTGGTGCTAGGCT
CGGTGTAGCAGAGGAAATAAAGGCATGCTTCCATGTGGGATGGTCTGATGATGAGAGTCCTGAACGTGGTTTTCAGTATA
TTTACCTCATGGAACAAGATTATTCACGCCTAAGATCTTCGGTTATAGCCCATGAGCTAAAGCTGGAAAGTGGAGAAACC
AGATGGGTTGTTGATACCATTGTTGGGAAAGAGGATGGACTCGGTTGTGAGAATCTACATGGAAGTGGTGCCATTGCCAG
TGCCTACTCTAATGCATACAGAGAGACGTTTACTCTGACATTTGTGACTGGGAAAGCTGTTGGCATTGGGGCTTATCTTG
CTCGGATAGGACTGCGGTGTATACAGCGTCTTGATCAACCAATTATTTTAACTGGGTTTGCTCCGCTAAACAAGCTTCTG
GGACGGGAGGTTTATACCTCCCAATTGCAACTGGGTGGCCCCAAAATCATGGCTGCAAATGGAGTTGCCCATCTCACAGT
GTCAGATGATCTTGAAGGTGTTTCTGCTATCTTGAAATGGCTCAGCTACGTACCTGCGTATGTCGGCGGTCCTCTTCCTA
TTCTGACACCTCTTGATCCACCGGAGAGACCTGTAACATACTTACCAGAGAATTCATGTGATGCCCGTGCGGCCATCTGT
GGCATTCAGGACACTCAAGGAGGCAAGTGGTTGGGTGGTATGTTTGACAGAGAAAGCTTTGTGGAAACATTAGGGGGATG
GGCGAAAACTGTTATCACCGGAAGGGCAAAGCTGGGTGGGGTTCCAGTCGGTGTCATAGCTGTGGAAACCGAGACAATGA
TGCAAGTGACCCCCGCTGATCCTGGTCAGCTTGATTCTGCAGAGCGTGTAGTCCCTCAAGCAGGACAGGTGTGGTTCCCA
GATTCGGCCGCGAAAACAGCCCAGGCACTGCTGGATTTCAACCATGAAGAGCTCCCATTGTTCATACTTGCTAACTGGAG
AGGCTTTTCTGGTGGCCAAAGGGATCTGTTTGAAGGAATCCTTCAGGCCGGTTCCATGATTGTCGAGAATCTGAGGACAT
ATAAGCAGCCTGCCTTTGTGTATATACCAAAGGCTGGAGAGCTGCGTGGAGGCGCATGGGTCGTGGTGGACAGCAAGGTC
AATCCTGAGCACATTGAGATGTATGCCGAGAGGAGTGCAAAAGGTAATGTCCTTGAGCCAAAGGCGCTAATTGAGATCAA
ATTTAAGCCAAATGAAGTCGAAGAGAGCATGTTAAGGCTTGACCCTCAGTTGGTCAGACTCAATGCTAGCCTCCTCAAAG
AAATCAAGATAGGCACATCGGAAACGGAGGCCATCAGGATCAGGAGTATGATGACCGCTCGGATGAAGCAGCTGATGCCC
ATATACACTCAGGTTGCTACCCGGTTTGCTGAACTGCACGACACCACTTCCAGAATGGTCGCCAAAGGTGTGATCAGAAA
GGTGGTGGACTGGGAGGAGTCCCGGGCCTTCTTCTACAGGAGGTTGCGAAGGAGGGTTGCTGAGGATTCACTTGCCAAAC
AAGTTAGAGAAGCCGCTGGTGAGCAGATGATGCCTACTTATGGATCGGCGCTGGAGTGTATCAAGGAATGGTATATGGCT
TCTCAAGGACAGGGAGATGGCGAGAAGTGGGACGATGACGAGGCTTTCTTTGCCTGGAAAGACGATTGTAGCAACTATGA
CAAGCATCTCGAGGAGATGAAAGCTGAACGAGTATCCAGGCTGTTGTCGCAACTTGCTGAAAGCTCAGATGTGAAGGCTT
TGCCCAACGGTCTCTCGCTCCTCCTTGGCAAAATGAATCCTTCAAAGAGGGAGCAGGTCATCAATGGCCTCAGGCAGCTT
CTTGGTTGA

Alignment

ORF - retro_taes_77 Open Reading Frame is conserved.

Retrocopy - Parental Gene Alignment summary:

• Percent Identity: 88.81 %
• Parental protein coverage: 94.13 %
• Number of stop codons detected: 0
• Number of frameshifts detected: 0

Retrocopy - Parental Gene Alignment:

Parental  METGEYYFLELNPRLQVEHPVTEWIAEINLPASQVVVGMGIPLYNIPEIRRFYGIEHGGGYHAWKEISAV
          METGEYYFLELNPRLQVEHPVTEWIA..NLPASQV.VGMGIPLYNIPEIRRFYG.EHGGGYH.WKEISAV
Retrocopy METGEYYFLELNPRLQVEHPVTEWIAGVNLPASQVAVGMGIPLYNIPEIRRFYGLEHGGGYHSWKEISAV

Parental  ATKFDLDKAQSVKPKGHCVAVRVTSEDPDDGFKPTSGRVEELNFKSKPNVWAYFSVKSGGAIHEFSDSQF
          A.KFDLDKAQSV.P.GHCVAVRVTSEDPDDGFKPT.GRVEELNFKSKPN.WAYFSVKSGGAIHEFSDSQF
Retrocopy AAKFDLDKAQSVRPTGHCVAVRVTSEDPDDGFKPTGGRVEELNFKSKPNAWAYFSVKSGGAIHEFSDSQF

Parental  GHVFAFGESRSLAIANMVLGLKEIQIRGEIRTNVDYTVDLLNAAEYRENKIHTGWLDSRIAMRVRAERPP
          GHVFAFGESRSLAIANMVLGLKEIQIRGEIRTNVDYTVDLLNAAEYRENKIHTGWLDSRIAMRVRAERPP
Retrocopy GHVFAFGESRSLAIANMVLGLKEIQIRGEIRTNVDYTVDLLNAAEYRENKIHTGWLDSRIAMRVRAERPP

Parental  WYLSVVGGALYEASSRSSSVVTDYVGYLSKGQIPPKHISLVNLTVTLNIDGSKYTIETVRGGPRSYKLRI
          WYLSVV.GALYEASSRSSSVVTDYVGYLSKGQIPP.HISLVNLTVTLNI.G.KYT..TVRGGP.SYKLRI
Retrocopy WYLSVVAGALYEASSRSSSVVTDYVGYLSKGQIPPRHISLVNLTVTLNIEGIKYTVKTVRGGPGSYKLRI

Parental  NESEVEAEIHSLRDGGLLMQLDGNSHVIYAETEAAGTRLLINGRTCLLQKEHDPSRLLADTPCKLLRFLV
          NESE.EAE.HSLRDGGLLMQLDGNSHVIYAETE.AGTRLLINGRTCLLQKEHDPS.LLADTPCKLLRFLV
Retrocopy NESEIEAEMHSLRDGGLLMQLDGNSHVIYAETEGAGTRLLINGRTCLLQKEHDPSKLLADTPCKLLRFLV

Parental  ADGSHVVADTPYAEVEVMKMCMPLLLPASGVIHFVMPEGQAMQASDLIARLDLDDPSSVRRAEPFHGTFP
          ADGSHVV.DTPYAEVEVMKMCMPLLLPASGVIHFVMPEGQAMQASDLIARLDLDDPSSVR.AEPFHGTFP
Retrocopy ADGSHVVSDTPYAEVEVMKMCMPLLLPASGVIHFVMPEGQAMQASDLIARLDLDDPSSVRKAEPFHGTFP

Parental  KLGPPTAISGKVHQKFAASVNSAHMILAGYEHNINHVVQDLLNCLDSPELPFLQWQELMSVLATRLPKDL
          KLGP..AISGKVHQKFAASVNSAHMILAGYEHNI.HVVQ.LLNCLDSPELPFL.WQELMSVLATRLPKDL
Retrocopy KLGPSAAISGKVHQKFAASVNSAHMILAGYEHNISHVVQYLLNCLDSPELPFLRWQELMSVLATRLPKDL

Parental  RNELDAKYKEYELNADFRKSKDFPAKLLRGVIEANLAYCSEKDRVTSERLVEPLMSLVKSYEGGRESHAR
          RNELD..YKEYELNADFRK..DFPAKLLR.VIEANLA.CSEKDR.TSERL.EPLMSLVKSYEGGRESHA.
Retrocopy RNELDGVYKEYELNADFRKGQDFPAKLLREVIEANLAHCSEKDRITSERLIEPLMSLVKSYEGGRESHAC

Parental  AVVKSLFEEYLSVEELFSDDIQSDVIERLRLQHAKDLEKVVYIVFSHQGVKSKNKLILRLMEALVYPNPS
          .VVKSLFEEYLSVEELFSDDIQSDVIERLRLQHAKDLEKVVYIVFSHQGVK.KN.LIL.LM..LVY.NPS
Retrocopy VVVKSLFEEYLSVEELFSDDIQSDVIERLRLQHAKDLEKVVYIVFSHQGVKNKNELILQLMDGLVYANPS

Parental  AYRDQLIRFSALNHTAYSGLALKASQLLEHTKLSELRTSIARSLSELEMFTEEGERISTPRRKMAINERM
          AYRDQLIRFSALNHTAYSGLALKASQLLE.TKLSELRTSIARSLSELEMFTEEGE..STPRRKMAINERM
Retrocopy AYRDQLIRFSALNHTAYSGLALKASQLLEQTKLSELRTSIARSLSELEMFTEEGEQVSTPRRKMAINERM

Parental  EDLVCAPVAVEDALVALFDHSDPTLQRRVVETYIRRLYQHYLVRGSVRMQWHRSGLIALWEFSEEHIEQR
          EDLVCAP.AVEDALVALFDHSDPTLQRRVVETYIRRLYQHYLVRGSVR.QWHRSGLIALWEFSEEHI...
Retrocopy EDLVCAPHAVEDALVALFDHSDPTLQRRVVETYIRRLYQHYLVRGSVRIQWHRSGLIALWEFSEEHI---

Parental  NGQSASLLKPQVEDPIGRRWGVMVVIKSLQLLSTAIEAALKETSHYGAGVGSVSNGNPINLNGSNMLHIA
          .GQSA.LLK.QV.DP.GRRWGVMVVIKSLQ.LSTAIEAALKETSHY.AG.GSVSNGNPIN.N..N.LHIA
Retrocopy -GQSAALLKQQVQDPRGRRWGVMVVIKSLQCLSTAIEAALKETSHYRAGAGSVSNGNPINSNRGNILHIA

Parental  LVGINNQMSTLQDSGDEDQAQERINKLSKILKDNTITSHLNGAGVRVVSCIIQRDEGRSPMRHSFKWSSD
          LVGI.NQM.TLQDSGDEDQAQERINKLSKILKD.TITSHLNGAGVRVVSCIIQRDEGR.PMRHSF.WS.D
Retrocopy LVGISNQMGTLQDSGDEDQAQERINKLSKILKDTTITSHLNGAGVRVVSCIIQRDEGRPPMRHSFQWSFD

Parental  KLYYEEDPMLRHVEPPLSTFLELDKVNLEGYNDAKYTPSRDRQWHMYTLVKNKKDPRSNDQRMFLRTIVR
          KLYYEEDPMLRHVEPPLSTFLELDKV.LEGY.DAKYTPSRDRQWH.YTLVKN.KDPRSNDQRMFLRTIVR
Retrocopy KLYYEEDPMLRHVEPPLSTFLELDKVHLEGYSDAKYTPSRDRQWHIYTLVKNNKDPRSNDQRMFLRTIVR

Parental  QPSVTNGFLFGSIDNEV---QASSSFTSNSILRSLMAALEEIELRAHSETGMSGHSHMYLCIMREQRLFD
          QPS.TNGF.FG.IDNEV...QASSSF.SNSILRSLMAALEEIEL.AH.E...S.HSHMY.CI.REQ.LFD
Retrocopy QPSMTNGFSFGHIDNEVCRAQASSSFISNSILRSLMAALEEIELHAHNEAVRSAHSHMYMCILREQLLFD

Parental  LIPSSRMTNEVGQDEKTACTLLKHMVMNIYEHVGVRMHRLSVCQWEVKLWLDSDGQANGAWRVVVTSVTG
          LIP.S....EVGQDE.TACTLLKHM.M.I.EHVGVRMHRLSVCQWEVKLWLD.DGQA.GAWRVVVT.VTG
Retrocopy LIPVSTRMDEVGQDEETACTLLKHMAMSIHEHVGVRMHRLSVCQWEVKLWLDCDGQASGAWRVVVTIVTG

Parental  HTCTVDIYREVEDPNTHKLFYRSATPTAGPLHGIALHEPYKPLDAIDLKRAAARKNETTYCYDFPLAFET
          H.CTVDIYREVED.NTH.LFYRSATP.AGPLHGI.LHEPYKPLDA.D.KR..ARKNETTYCYDFPL.FE.
Retrocopy HSCTVDIYREVEDSNTHELFYRSATPAAGPLHGIPLHEPYKPLDALDQKRNTARKNETTYCYDFPLVFEK

Parental  ALKKSWESGISHVAESNEHNQRYAEVTELIFADSTGSWGTPLVPVERPPGSNNFGVVAWNMKLSTPEFPG
          ALK.SW.SGISHVAE.N.HNQRYA.VTEL.FADSTGSWGTPLVPVERPPG.N..G.VAWNMKLSTPEFP.
Retrocopy ALKESWKSGISHVAEANGHNQRYAQVTELMFADSTGSWGTPLVPVERPPGMNDIGTVAWNMKLSTPEFPD

Parental  GREIIVVANDVTFKAGSFGPREDAFFDAVTNLACERKIPLIYLSATAGARLGVAEEIKACFHVGWSDDQS
          GREIIVVANDVTFKAGSFGPREDAFFDAVTNLACERKIPLIYL.AT.GARLGVAEEIKACFHVGWSDD.S
Retrocopy GREIIVVANDVTFKAGSFGPREDAFFDAVTNLACERKIPLIYLAATSGARLGVAEEIKACFHVGWSDDES

Parental  PERGFHYIYLTEQDYSRLSSSVIAHELKVPESGETRWVVDTIVGKEDGLGCENLHGSGAIASAYSKAYRE
          PERGF.YIYL.EQDYSRL.SSVIAHELK..ESGETRWVVDTIVGKEDGLGCENLHGSGAIASAYS.AYRE
Retrocopy PERGFQYIYLMEQDYSRLRSSVIAHELKL-ESGETRWVVDTIVGKEDGLGCENLHGSGAIASAYSNAYRE

Parental  TFTLTFVTGRAIGIGAYLARLGMRCIQRLDQPIILTGYSALNKLLGREVYSSQMQLGGPKIMATNGVVHL
          TFTLTFVTG.A.GIGAYLAR.G.RCIQRLDQPIILTG...LNKLLGREVY.SQ.QLGGPKIMA.NGV.HL
Retrocopy TFTLTFVTGKAVGIGAYLARIGLRCIQRLDQPIILTGFAPLNKLLGREVYTSQLQLGGPKIMAANGVAHL

Parental  TVSDDLEGVSAILKWLSYVPPYVGGPLPIVKSLDPPERAVTYFPENSCDARAAICGIQDTQ-GKWLSGMF
          TVSDDLEGVSAILKWLSYVP.YVGGPLPI...LDPPER.VTY.PENSCDARAAICGIQDTQ.GKWL.GMF
Retrocopy TVSDDLEGVSAILKWLSYVPAYVGGPLPILTPLDPPERPVTYLPENSCDARAAICGIQDTQGGKWLGGMF

Parental  DRESFVETLEGWAKTVITGRAKLGGIPVGIIAVETETVMQVIPADPGQLDSAERVVPQAGQVWFPDSAAK
          DRESFVETL.GWAKTVITGRAKLGG.PVG.IAVETET.MQV.PADPGQLDSAERVVPQAGQVWFPDSAAK
Retrocopy DRESFVETLGGWAKTVITGRAKLGGVPVGVIAVETETMMQVTPADPGQLDSAERVVPQAGQVWFPDSAAK

Parental  TAQALLDFNREELPLFILANWRGFSGGQRDLFEGILQAGSMIVENLRTYKQPAFVYIPKAGELRGGAWVV
          TAQALLDFN.EELPLFILANWRGFSGGQRDLFEGILQAGSMIVENLRTYKQPAFVYIPKAGELRGGAWVV
Retrocopy TAQALLDFNHEELPLFILANWRGFSGGQRDLFEGILQAGSMIVENLRTYKQPAFVYIPKAGELRGGAWVV

Parental  VDSKINPEHIEMYAERTARGNVLEAPGLIEIKFKPNELEESMLRLDPELISLNAKLLKETSASPSPWETA
          VDSK.NPEHIEMYAER.A.GNVLE...LIEIKFKPNE.EESMLRLDP.L..LNA.LLKE.....S..E..
Retrocopy VDSKVNPEHIEMYAERSAKGNVLEPKALIEIKFKPNEVEESMLRLDPQLVRLNASLLKEIKIGTSETE--

Parental  AAAETIRRSMAARRKQLMPIYTQVATRFAELHDTSARMAAKGVISKVVDWEESRAFFYRRLLRRLAEDSL
          ..A..IR..M.AR.KQLMPIYTQVATRFAELHDT..RM.AKGVI.KVVDWEESRAFFYRRL.RR.AEDSL
Retrocopy --AIRIRSMMTARMKQLMPIYTQVATRFAELHDTTSRMVAKGVIRKVVDWEESRAFFYRRLRRRVAEDSL

Parental  AKQVREAAGEQQMPTHRAALECIKKWYLASQG-GDGEKWSDDEAFFAWKDDPDKYGKYLEELKAERASTL
          AKQVREAAGEQ.MPT...ALECIK.WY.ASQG.GDGEKW.DDEAFFAWKDD...Y.K.LEE.KAER.S.L
Retrocopy AKQVREAAGEQMMPTYGSALECIKEWYMASQGQGDGEKWDDDEAFFAWKDDCSNYDKHLEEMKAERVSRL

Parental  LSNLAETSDAKALPNGLSLLLSKMDPAKREQVMDGLRQLLG
          LS.LAE.SD.KALPNGLSLLL.KM.P.KREQV..GLRQLLG
Retrocopy LSQLAESSDVKALPNGLSLLLGKMNPSKREQVINGLRQLLG

Legend:

• *: Stop codon
• >: Forward frameshift by one nucleotide
• <: Reverse frameshift by one nucleotide

Expression

RNA-Seq

Triticum aestivum was not studied using RNA-Seq expression data.

ChIP-Seq

Triticum aestivum was not studied using ChIP-Seq data.

EST

Triticum aestivum was not studied using EST data.

TSS

Triticum aestivum was not studied using FANTOM5 data.

Lab

retro_taes_77 was not experimentally validated.

Homology

Retrocopy orthology:

Triticum aestivum does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to help section.

---

Parental genes homology:

Parental genes homology involve 1 parental gene, and 1 retrocopy.

Species	Parental gene accession	Retrocopies number
Triticum aestivum	Traes_3AL_340F1516D	1 retrocopy	retro_taes_77 ,