RetrogeneDB ID: | retro_tbel_1128 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3917:227238..227578(-) | ||
Located in intron of: | ENSTBEG00000002905 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MOCS2 | ||
Ensembl ID: | ENSTBEG00000008942 | ||
Aliases: | None | ||
Description: | molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:7193] |
Percent Identity: | 76.72 % |
Parental protein coverage: | 60.85 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MSSLEISSSCFNQETKLPLSPLLVEGSTFESLRKEMDEVEEESKDIIKFTAEKLSVDEVSQLVVSPLCGA |
M.SLEISSS.FNQ.TKL.L.P....GST.E...K.MDEVEE.SKDIIKF.A.KLSVDEVSQLV.SPLCG. | |
Retrocopy | MPSLEISSSYFNQGTKLSLFPPF--GSTLETFGKGMDEVEEKSKDIIKFSAKKLSVDEVSQLVISPLCGS |
Parental | ISLFVGTTRNNFEG-KKVISLEYEAYLPMAENEVRKICSDIREKWP |
ISLFV.TTRNNF.G.KKV.SL.YE..LPMAENEVRKICSDIR.KWP | |
Retrocopy | ISLFVRTTRNNFKG>KKVTSLGYEVNLPMAENEVRKICSDIRQKWP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000005380 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000015752 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000020449 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000019459 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000011406 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000011108 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000010175 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000010607 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000008942 | 3 retrocopies |
retro_tbel_1128 , retro_tbel_216, retro_tbel_3310,
|
Tarsius syrichta | ENSTSYG00000001351 | 1 retrocopy |