RetrogeneDB ID: | retro_tsyr_1408 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_430387:570..1176(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTSYG00000010967 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.51 % |
Parental protein coverage: | 98.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | FLRKVYGILSLQVLLTTMTSAVFLYFESVRTFVHNSPAVILVSAFGSLGLIFALTLHRHKYPLNLYLLFG |
FLRKVYGILSLQVLLTTMT.AVFLYFESVRTFVHNSPAVILVSAFGSLGLIFALTLHRHKYPLNLYLLFG | |
Retrocopy | FLRKVYGILSLQVLLTTMTFAVFLYFESVRTFVHNSPAVILVSAFGSLGLIFALTLHRHKYPLNLYLLFG |
Parental | FTLMEALTV-FVVTFYDIRIILQAFILTTTVFLALTAYTLQSKRDFSKFGAGLFAAFWILWLSGFLRLFF |
FTLMEALTV.FVVTFYDIRIILQAFILTTTVFLALTAYTLQSKRDFSKFGAGLFAAFWILWLSGFLRLFF | |
Retrocopy | FTLMEALTVAFVVTFYDIRIILQAFILTTTVFLALTAYTLQSKRDFSKFGAGLFAAFWILWLSGFLRLFF |
Parental | YSETVEVVFAAIGALLFCGFIIYDTHSLMHRLSPEEYVLAAINLYLDIINLFLHLLRLLEAV |
YSETVEVVFAA.GALLFCGFIIYDTHSLMHRLSPEEYVLAAINLYLDIINLFLHLLRLLEAV | |
Retrocopy | YSETVEVVFAAVGALLFCGFIIYDTHSLMHRLSPEEYVLAAINLYLDIINLFLHLLRLLEAV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000026993 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000014558 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000007728 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000010967 | 3 retrocopies |
retro_tsyr_1322, retro_tsyr_1408 , retro_tsyr_936,
|