RetrogeneDB ID: | retro_tsyr_1682 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_54214:9286..9664(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PPT2 | ||
Ensembl ID: | ENSTSYG00000002885 | ||
Aliases: | None | ||
Description: | palmitoyl-protein thioesterase 2 [Source:HGNC Symbol;Acc:9326] |
Percent Identity: | 69.84 % |
Parental protein coverage: | 72.83 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | SICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFYD |
SICNYWHDPHH.D..L.ASS.LAL.NGER.HP.A...RK.F..VG.LVL.GGPDDG.ITP...SFFGF.D | |
Retrocopy | SICNYWHDPHHNDVDLGASSLLALTNGERVHPSAIA*RKSFFCVGHLVLTGGPDDGMITPCEFSFFGFCD |
Parental | ANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTVWHSNRTLYETCIEP |
ANE.VLE.E.QLVYL.DS.GLK.LLA.GA.VRCPMA.ISH....SN.TL..TC.EP | |
Retrocopy | ANEMVLETEKQLVYLQDSLGLKILLAQGATVRCPMAEISHRA*DSNCTLCKTCTEP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000015368 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000002885 | 1 retrocopy |
retro_tsyr_1682 ,
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