RetrogeneDB ID: | retro_ttru_1549 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_115911:124216..125242(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUDT9 | ||
Ensembl ID: | ENSTTRG00000004207 | ||
Aliases: | None | ||
Description: | nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:HGNC Symbol;Acc:8056] |
Percent Identity: | 71.97 % |
Parental protein coverage: | 98.29 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LGKTLATVSLSVALASVTLKSLGRCSIAACSNSFSSCGFHLNSNMMSGSDGTKENSHNKARTSPYPGSKV |
L.K.LATVSLSVALASV.........I.A....FSS.GF......MS.S.G..E..H.KARTSPYPGSKV | |
Retrocopy | LAKALATVSLSVALASVAVRPSSCPNISAG*SPFSSHGFP--PSFMSVSNGPAETPHKKARTSPYPGSKV |
Parental | QRSQVPNEKVGWLVEWQDYNPVEYTAVSVLAGPRWADPQISESSFSPKFNEKDGHVERKSQ-NGLYEIEN |
..SQVPN.KV.WLVEW..Y..VEYT..SVLAGPRWADP...E..FS.KFNEKDGHVER.SQ.NG.YE.EN | |
Retrocopy | GQSQVPNGKVSWLVEWPEYKAVEYTSGSVLAGPRWADPLLGERNFSLKFNEKDGHVERRSQ>NGWYEVEN |
Parental | GRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDRSGNKITHPISGKNILQFVAIKRKDCGEWAIPG |
GRPRNPA.R.GLV..GLLGRWGPNHAADPI.T.WK.D..GN..THP.SG.NILQFVAIKRKDCG.WAIPG | |
Retrocopy | GRPRNPAVRPGLVC*GLLGRWGPNHAADPILTGWKKDSKGNTVTHPVSGRNILQFVAIKRKDCGAWAIPG |
Parental | GMVDPGEKISATLKREFGEEALNSLQKSGAEKRELEEKLHKLFSQEHLVIYKGYVDDPRNT-DNAWMETE |
GMVD.GEKIS.T.KREFGE.A.NSLQKS.AE..E....LHKLFSQEH.V..KGYVDDP.NT.DN.WM.TE | |
Retrocopy | GMVDLGEKISTTMKREFGEGAMNSLQKSRAETQESKKQLHKLFSQEHFVVCKGYVDDPWNT<DNTWMGTE |
Parental | AVNYHDETGEIMDNLTLEAGDDAGKVKWVDISDKLKLYASHFQFIKLVAEKRDAHWSEDSETDCHG |
AVNY.DETGE.MD.L.LEAGDDA.KV.WVD..DKLKLYASH.QFI.LVAEKR.AHWSED...DCHG | |
Retrocopy | AVNYRDETGEEMDHLLLEAGDDAKKVGWVDNNDKLKLYASHSQFIQLVAEKRGAHWSEDVYPDCHG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |