Detailed information on CNT0032680


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9FUY2|LEUNG_ARATH, E-value = 0.0

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0003540, E-value = 4e-09 (V. vinifera)
CNT0021980, E-value = 1e-24 (A. trichopoda)
CNT0011364, E-value = 5e-27 (S. tuberosum)
CNT0040304, E-value = 4e-09 (S. moellendorffii)
CNT0036050, E-value = 1e-15 (C. reinhardtii)

Expression of CNT0032680

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MYIDVDRWAIEYVHFSSYFPVIFIIILSTPTSFLFTALLEHPSLSCTWIKELYVWQFSNLQPKCSTAC*

>peptide 2 (75 aa)
DFEDEITGRDRSEWFRFRPCALGGRRVVAACLAARVSRAMLFFFFLGGGFPLNFVCLLDEPTVLVCGTVFWIQYN*

>peptide 3 (81 aa)
MLIHGWCKDRKTGIKARSLSLAQSPGVSYQARPNIIFPYFLIIMGYTSPFISDILRPPHLKPPHSFALTCYILVMSTSSLC*

>peptide 4 (53 aa)
MFDLVQACHGLLHLPLTKPCGFGMLTIQVIHSVLSRVIQHLLCHLTSIRTKKI*

>peptide 5 (432 aa)
MPVDGGMPNSFGGVDQTTKKRKKPGSSSGRANSSGTANTAGPSPSSAPSTPSTHTPGDAMSMPQLQQNGGSAKPLVMFGSDGAGSLTSPANALADVDRLL
EDGSLDENVESFLSQDDMDPRDSLGRSMDASKGFGFAEVAKARASATKVTCCHFSSDGKLLATGGHDKKVLLWCTEPALKPTSSLEEHSALITDVRFSPS
MSRLATSSFDKTVRVWDADNTSYSLRTFTGHSASVMSLDFHPNKEDMICSCDGDGEVRSWSINNGSCLTFVKVFKGGATQMRFQPQKGKYLAAASEKAIY
ILDGETQLACRNPLQGHTKNIHSLCWDSTGDNLASVSEDSVRIWSFAPGHDGEFVNELSCSGNKFQSCVFHPSYPYLLVIGCYESLELWDIREKNAMTVH
SAHDGLVAALAASSATGKVASVSHDRFVKLWK*

>peptide 6 (36 aa)
MREAGLLSFCHAGGGVLQCGNITKMETGAVVGGEVS*

>peptide 7 (32 aa)
MAKQSSGGSHSCAGGGEKQQGSWGQSDWRQRR*

>peptide 8 (31 aa)
MVLLVVCQAVCNKFSPGVHRFLGQLRVSRQR*

>peptide 9 (77 aa)
MVHWMKMLNLFYLRMTWTLGIHWGAPWMLVKGLVLLKLRRHVQVQPKLPVVTSPLMANCSLLVDMIKRFFYGVQSLL*

>peptide 10 (35 aa)
MLVFVLQIVRNLLNKRGYHKVAREVNEHKSASMWQ*

>peptide 11 (52 aa)
MERHNLLVETLCRGTQRIFTHFVGILPVTIWLLSVKIVSEYGRLLLDMTVNL*

>peptide 12 (376 aa)
MKRNLQATAKAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDVAASYIETQHMKAREQQQQQQQQPPQQRQQQPQHIQMQQMLLQRAAQ
QQQQQQQQQQQQQQQQQQQQQQQQQQRRDGTHLLNGTASGLPGNNPLMRQNQSTANVMATKMYEERLKLPSQRDGLDEVSIKQRYGENAGQLLDSNEALL
KASASGQSSGQILHGTVGGLSGSLQQVQSRSPQIPGPAQSIKTEMNPILTPRSAGPEGSFIGVQGSNQAGNNLTLKGWPLTGLEQLRSGLLQQKSFVQNQ
QQLQQQIHFLTPQQQQQLMLQAQQNMASPTSSDVDSRRLRMMLNNRNVGQTNSGGDIIPNIGSPSLSGGDVDILIK*

>peptide 13 (72 aa)
MGACQTLSVELIKLQRRGRNLVHPLVEPIVQELQILLALLQVLHHQRLPLIHQEMQCLCHSCSRMVVPQNHW*

Sequence

>CNT0032680
GCGATTTTGAAGATGAAATCACGGGAAGGGATCGAAGTGAGTGGTTCCGGTTCCGGCCTTGTGCTCTAGGTGGGAGAAGGGTTGTTGCGGCGTGTTTGGC
CGCTAGGGTTTCGCGGGCGATGTTGTTTTTCTTTTTTTTGGGGGGTGGATTTCCTTTGAACTTTGTTTGTTTATTGGACGAACCCACTGTTTTGGTTTGC
GGGACTGTGTTCTGGATACAGTATAACTAGCTTCTCTGTACGATTTGGAATACCGGTGGGAAAATAAGATAACATGATTTCTGCCAGTAGGTTTTGAATA
TTCGACTGTATTATTTGAGCTATAGTGATCGTGAGAAGAGAGGAGCGGGATTTGTTTGGCGGTGATTAGTTTTTTCAGGATCTGTGGAATCCTGGATTAG
CCTCCTACATCGGTTTACTTACTGACAGTATGATAGGGAGTACTTAGAGAATAACTTGATTTCGCTTAGACATGGATGAAATGATTTGATAGAGCAGTTC
TGGTATGCTACTACAAGTTAGATTAGATCAAAGCGGTGCAGTTTGATCTGTATAAGAATTTGAAGAGGAGTGGAAATATCCCATTCTTCTGGTAACTAGG
CTATACTTTCACTGATTAAGTAATATATAAGCATTATGTTTGCATAGACAAGTAATAACTAGGAAGCCTCATTTTAGTGTTGGTCAATTGGAAATTGGTC
ACTCTAAATGCTTCTTTCAAAATATAACTGATGTTGATTCATGGATGGTGTAAGGATCGAAAGACAGGGATAAAGGCGAGATCGCTGAGCTTGGCCCAAT
CACCAGGAGTCTCTTATCAAGCCAGACCTAATATTATATTTCCTTATTTCTTAATTATAATGGGGTATACGAGTCCTTTTATATCGGATATATTAAGACC
TCCCCACTTGAAGCCACCTCACAGTTTTGCACTGACGTGTTACATTCTGGTGATGTCCACGTCATCACTGTGCTAGCAGGCAGCAGGATTTTGAGCACCC
CCGTTGCTCGGTAGTGACGTCCCTCTCTATACCATATAGGGAAGACTGACTTGGCATCCAAGGAACTTATCTTTGATATTATAAAAACTAATTCGTTCTC
TATCTCTAATCTCTAATCTTTCCTAATTAGATAATCTCTTAGCTTTGTTTGATCTATTCCTAATTTGTCCTGCCTAACCTGCCCCATGGGCCTGACGTGT
GGTCATAACACTAAAACCCTCATCGTGACACAGCTCGAACAAGCTGTCAGCTATTCCTCCCTGATATCTTGACAATGCTGGATTTGTGTCCATCAATAGG
AGTCAAAACATAAGTGGTAAGTCCTGGAGAAGAGCTCATCGGGTGCCAAAGGAACTGAACCACTGCTCTTGAATATAAAGAAGCGACTCTGCCACGGTCT
GAAGGTGGAATGTTGGTGTTCGTACTACAAATAGTCCGTAATTTGCTGAATAAACGAGGTTACCATAAAGTAGCTAGGGAGGTGAACGAGCACAAAAGTG
CATCAATGTGGCAATGAGAGAGGCAGGTTTATTGTCCTTTTGCCATGCCGGAGGTGGGGTTCTACAATGTGGTAATATCACGAAGATGGAAACTGGAGCA
GTGGTAGGCGGCGAAGTCAGCTAAGTAGAAGCGAATCCTCCAGTCAGTGAGTCAAGTACCCTCAGCTGCAGCAGTGGTTTGAGGGGCTAGAGCAGTCCAA
GCTGGTGGAACAGGGGCAGGAAGCGGAGAGTTGGGTGACAGCTTGGCGGACGTGGGTTGCTGAAGCAGAGCAACATGGCTGATAGCGAGCAGAGCTGGTG
GAGGAAGCAGAGCTCAGGACGATGGGATGGCTAGCACCAGGAAATTGGTGGCAATCTAGTGGATTTGTGGGATGGAAGGAGAGTAGGCCACGTTAGAGGT
AGAGACGAGTCTGCATGGGAGGATTGAGGGCAATGGAAGTTAATGGCAAAGCAGAGTAGTGGTGGTAGCCATAGTTGTGCTGGGGGCGGAGAGAAGCAGC
AGGGAAGCTGGGGGCAGAGTGACTGGAGACAGAGAAGATGAGGGCAGTTATAGCAGAATGGGCAGAGGAAGTTGGCAGCATGCTAATTGATTTATTGAGA
AACTAGAAGGGAAAAAATGGATGTACATTGATGTAGATAGATGGGCCATTGAATATGTTCACTTTTCCAGCTATTTTCCTGTCATTTTTATTATAATTCT
TTCTACGCCTACTAGTTTCTTATTCACCGCTCTGCTTGAACATCCTTCGTTGTCTTGTACTTGGATAAAAGAGTTGTATGTTTGGCAATTTTCTAACCTC
CAACCTAAATGTTCGACTGCTTGCTGAAATAGGCTGGATGTCTACATATATGACTACTTTATGAAGAGAAATCTGCAGGCAACTGCAAAGGCCTTCCAAG
CAGAAGGGAAGGTCTCTTCGGATCCAGTTGCGATTGATGCTCCTGGTGGTTTTCTTTTTGAGTGGTGGTCAGTTTTTTGGGATATTTTCATAGCAAGGAC
AAATGAGAAGCATTCAGATGTTGCGGCTTCATATATTGAAACTCAGCACATGAAAGCCAGGGAGCAACAACAGCAGCAGCAGCAGCAACCTCCTCAACAG
CGACAACAGCAACCACAGCATATACAAATGCAACAAATGTTGCTACAAAGAGCAGCACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGC
AACAGCAGCAACAGCAGCAGCAGCAGCAACAACAACAGCGCAGAGATGGTACTCATCTTCTTAATGGTACTGCAAGTGGACTTCCTGGAAACAATCCTTT
AATGCGGCAAAACCAGAGTACTGCAAATGTTATGGCAACAAAAATGTATGAGGAGAGGTTAAAGTTGCCTTCCCAGAGAGATGGTTTGGACGAGGTGTCA
ATTAAGCAAAGATATGGAGAGAATGCTGGACAACTACTTGATTCAAACGAAGCGTTGTTGAAAGCATCTGCAAGTGGACAATCTTCAGGGCAAATTTTGC
ATGGTACTGTTGGTGGTCTGTCAGGCAGTCTGCAACAAGTTCAGTCCAGGAGTCCACAGATTCCTGGGCCAGCTCAGAGTATCAAGACAGAGATGAATCC
CATTTTGACACCAAGGTCAGCAGGTCCTGAGGGGTCATTTATTGGTGTCCAAGGGTCTAATCAAGCTGGAAACAATTTGACTCTGAAAGGATGGCCACTC
ACGGGACTTGAACAACTTCGCTCTGGACTTCTGCAGCAGAAGTCATTTGTGCAGAATCAACAGCAATTACAACAGCAGATTCATTTTCTTACCCCGCAAC
AGCAGCAGCAGCTTATGTTGCAGGCTCAGCAAAATATGGCTTCCCCAACATCTAGTGATGTTGACAGCAGACGATTAAGGATGATGCTTAACAACAGGAA
TGTTGGGCAGACAAACAGTGGTGGTGATATTATTCCAAATATTGGTTCTCCTAGTCTAAGTGGTGGAGATGTAGATATCCTGATAAAGTAGAAGAAAATT
GCTCAGCAGCAACAATTATTACAGCAGCAAAGCAACAGCCAGCAGCATCCACAGCTTCAGCAGCCTGCTGTCTCCAGTCAGCAGTCTCAAAGCTCAAATC
AGTTTCTCCAACAAGAAAAACCAGGAATCGGAACTATGCCTGTTGATGGGGGCATGCCAAACTCTTTCGGTGGAGTTGATCAAACTACAAAGAAGAGGAA
GAAACCTGGTTCATCCTCTGGTAGAGCCAATAGTTCAGGAACTGCAAATACTGCTGGCCCTTCTCCAAGTTCTGCACCATCAACGCCTTCCACTCATACA
CCAGGAGATGCAATGTCTATGCCACAGCTGCAGCAGAATGGTGGTTCCGCAAAACCATTGGTAATGTTTGGCTCTGATGGTGCTGGAAGTTTGACGTCTC
CAGCAAATGCACTGGCTGACGTGGATCGTTTGCTAGAAGATGGTTCATTGGATGAAAATGTTGAATCTTTTCTATCTCAGGATGACATGGACCCTAGGGA
TTCATTGGGGCGCTCCATGGATGCTAGTAAAGGGTTTGGTTTTGCTGAAGTTGCGAAGGCACGTGCAAGTGCAACCAAAGTTACCTGTTGTCACTTCTCC
TCTGATGGCAAACTGCTCGCTACTGGTGGACATGATAAAAAGGTTCTTTTATGGTGTACAGAGCCTGCTCTAAAGCCTACATCTTCATTAGAAGAACATT
CGGCATTGATTACGGATGTTCGATTTAGTCCAAGCATGTCACGGCTTGCTACATCTTCCTTTGACAAAACCGTGCGGGTTTGGGATGCTGACAATACAAG
TTATTCACTCCGTACTTTCACGGGTCATTCAGCATCTGTTATGTCACTTGACTTCCATCCGAACAAAGAAGATATGATTTGCTCCTGTGATGGTGATGGT
GAAGTCCGCAGCTGGAGCATAAATAATGGTAGCTGCCTGACCTTTGTTAAGGTCTTTAAGGGAGGTGCTACTCAGATGCGATTTCAACCTCAAAAGGGAA
AATATCTTGCAGCTGCCTCAGAGAAGGCCATCTACATACTTGATGGAGAGACACAACTTGCTTGTAGAAACCCTCTGCAGGGGCACACAAAGAATATTCA
CTCACTTTGTTGGGATTCTACCGGTGACAATCTGGCTTCTGTCAGTGAAGATAGTGTCAGAATATGGTCGTTTGCTCCTGGACATGACGGTGAATTTGTG
AATGAGTTGAGTTGCAGCGGGAACAAGTTCCAGTCATGCGTTTTTCACCCCTCTTACCCATATTTGCTAGTAATTGGATGCTACGAGTCTTTGGAACTCT
GGGACATTAGGGAGAAGAACGCCATGACGGTCCACAGTGCTCATGATGGTTTAGTTGCAGCGCTAGCAGCATCGAGCGCAACAGGCAAGGTTGCCTCAGT
AAGCCATGATAGGTTTGTCAAGCTCTGGAAATGACTTGCTCCAGGTGACCACATGACAAAAGAGGGTAGCTAACAAAAAAAAAAAATCTTGAACCGCTTT
GGGTGCAAGAACTAACCTGGTTTGTGTTTTGTGGTTGTCTTCAGTTGTACCGTGTATGCTGCTCTATTAGCTTCTGAAGTTTGTAACTCTGTAGAAATGT
TTGTTGGCGTGCTGTAACTCTCAACATGTCTCTGATTTGTACTGATCATAAGTTACAAAGTCTGTTAGTCTTTTTCCTTATGTGTTGTGATGCATCGTCT