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Detailed information on CNT0011364


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9FUY2|LEUNG_ARATH, E-value = 0.0

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003540, E-value = 6e-07 (V. vinifera)
CNT0021321, E-value = 2e-06 (Z. mays)
CNT0021980, E-value = 3e-36 (A. trichopoda)
CNT0032680, E-value = 3e-27 (O. sativa)
CNT0038783, E-value = 6e-07 (S. moellendorffii)
CNT0036900, E-value = 2e-13 (C. reinhardtii)

Expression of CNT0011364

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MFVSVQAWQDLQHLLLTKLSGFGMLTIRATHFGLSLGILLV*

>peptide 2 (60 aa)
MEAWQILFVEMIRLQKTRLGGKENTLFHLRGLPIAQELQTLLDLPQVLLLQRHLLTHLEM*

>peptide 3 (50 aa)
MFYVHCKIFYWCLKRYLCLSYLALGFVFCYFFFPHLCLKDPCTNPILCSS*

>peptide 4 (898 aa)
MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQIMKAREQQQQQQQSQQPQ
HLQQQQQQQQQQQQQQQHQLQMQQILLQRQQQQQQQQQHQQQQQQQQQQAQQQQQRRDGNHLLNGTTNGIGGGDSLLRQNTGTANALATKMYEERLDDAA
MKQRFSENVNQLLDPNHASVLKSAAAASAGQPSGQMLHGTTGSMSPQVQARSQQLPGSTPDIKTEINPMLNPRAAGPEGSLIGIPGSNQAGNNLTLKGWP
LTGYDQLRSSGLLQQPKSFMQGSQPFHQLQMLSPQHQQQLILAQQNLTSPSASDVESRRLRMLLSNRNSSMGKDGLSNSVGDVVPNMSSPSQGPCPVLPR
GDQDILLKLRMAQFQQQQQQQQQQQQQQQHSGNPQQSQQQQLPQHSLSGQQPQSSNHSLQQDKIMGSGTGDGSMANSFRGNDQASKNQTGRKRKHPVSSS
GPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMPVLQHSGSSSKPLMMFGADNNGTLTSPSNQLADMDRFEVDGSLEDNVESFLSQDEVDPRDAVGRGM
DVSKGFSFNEVNAVRASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVRVWDADNPGYSLRTFT
GHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQVRFQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELL
ASVSEDSVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNENKTMTLTGHEGLIASLAVSGVAGLVASASHDKFVKLWK*

>peptide 5 (56 aa)
MALLRRHQINWLIWIVLRLMVLLKIMLNRFYLKTRWTLEMQLVVVWMLVKASHLMK*

>peptide 6 (55 aa)
PSSEKEENFSFMREKIVKKKLKKIKKKVILFLSFSSVILSPSIFKIPILYAKTLM*

>peptide 7 (37 aa)
MLLVVFYLNGGLYFGTYSSQGPMRSTRKLLPLISRHK*

Sequence

>CNT0011364
CCCCATCATCAGAAAAAGAAGAGAATTTCAGTTTCATGAGAGAAAAAATAGTAAAAAAAAAGCTGAAGAAAATTAAAAAAAAAGTCATTCTTTTTCTTTC
TTTTTCATCAGTCATACTGAGTCCATCCATCTTCAAGATTCCAATTTTATATGCAAAAACACTAATGTAAAGGAGGGCAAGGAAGAAGAAGTAGGTTTCT
AAGGATCTGGCATTATTAAGAAGAGTTTGTTTGAATTACTGGATTACTCAACATGTCTCAGACCAACTGGGAAGCTGATAAAATGTTAGATGTCTATATT
CATGATTATTTAGTGAAAAGGGATCTAAAGGCTTCTGCTCAGGCCTTTCAAGCTGAAGGGAAAGTGTCATCTGACCCTGTTGCTATTGATGCTCCTGGTG
GTTTTCTATTTGAATGGTGGTCTGTATTTTGGGACATATTCATCGCAAGGACCAATGAGAAGCACTCGGAAGTTGCTGCCTCTTATATCGAGACACAAAT
AATGAAGGCAAGGGAGCAGCAGCAACAACAGCAGCAATCTCAACAACCTCAACATCTGCAGCAGCAACAGCAACAACAGCAACAGCAACAACAACAGCAG
CAGCACCAACTGCAGATGCAGCAGATTTTGTTGCAGAGGCAGCAACAGCAGCAGCAACAGCAGCAACACCAACAGCAGCAGCAACAGCAACAGCAGCAAG
CACAGCAGCAACAACAGCGTAGAGATGGTAACCACCTCTTGAATGGCACAACTAATGGGATTGGTGGAGGTGACTCTCTCCTGAGACAGAATACTGGAAC
TGCAAATGCATTGGCTACAAAGATGTACGAGGAAAGATTAGACGATGCAGCTATGAAGCAAAGGTTTAGTGAGAATGTCAATCAGCTTTTAGATCCAAAT
CATGCATCTGTGCTGAAATCTGCAGCAGCAGCATCAGCTGGGCAGCCCTCAGGGCAAATGCTGCATGGTACTACTGGTAGCATGTCCCCACAGGTTCAGG
CACGTAGTCAGCAACTTCCAGGATCTACACCAGACATAAAGACTGAAATCAATCCGATGCTTAATCCCCGAGCTGCAGGTCCCGAAGGATCCTTGATTGG
AATTCCTGGATCAAATCAAGCTGGTAACAATTTGACTTTGAAAGGATGGCCCCTCACTGGCTATGATCAGCTGAGGTCATCAGGGCTTCTCCAGCAGCCA
AAGTCTTTTATGCAGGGTTCTCAGCCCTTTCATCAACTGCAAATGCTATCACCGCAACACCAGCAACAACTTATCCTAGCACAGCAGAATTTGACTTCAC
CATCTGCTAGTGACGTCGAAAGCAGAAGGCTACGGATGCTCCTTAGTAATCGGAACTCTAGTATGGGCAAGGATGGCCTTTCAAATTCTGTTGGTGATGT
TGTCCCAAATATGAGTTCACCTTCACAGGGTCCTTGCCCTGTTTTGCCCCGTGGAGATCAAGATATTTTGCTCAAGTTGAGGATGGCCCAATTCCAGCAG
CAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCATAGTGGTAATCCACAGCAGTCGCAACAGCAGCAGCTTCCTCAGCACTCACTTTCTGGTC
AGCAACCACAGAGTTCAAATCACAGTCTACAACAAGATAAAATTATGGGCAGTGGCACAGGAGATGGAAGCATGGCAAATTCTTTTCGTGGAAATGATCA
GGCTTCAAAAAACCAGACTGGGAGGAAAAGAAAACACCCTGTTTCATCTTCGGGGCCTGCCAATAGCTCAGGAACTGCAAACACTGCTGGACCTTCCCCA
AGTTCTGCTCCTTCAACGCCATCTACTCACACACCTGGAGATGTGATTTCAATGCCTGTCTTACAACATAGTGGAAGTTCTTCGAAGCCATTGATGATGT
TTGGAGCAGATAATAATGGCACTCTTACGTCGCCATCAAATCAATTGGCTGATATGGATCGTTTTGAGGTTGATGGTTCTCTTGAAGATAATGTTGAATC
GTTTTTATCTCAAGACGAGGTGGACCCTCGAGATGCAGTTGGTCGTGGTATGGATGTTAGTAAAGGCTTCTCATTTAATGAAGTGAATGCTGTTCGGGCT
AGTAGCAGTAAAGTTGTTTGTTGTCATTTCTCCTCTGATGGAAAATTGCTAGCTAGTGGTGGCCATGACAAAAAGGCTGTTTTATGGTATACTGATACCT
TAAAACAAAAAACAACACTTGAGGAGCACTCATCACTCATTACTGATGTTCGTTTCAGTCCAAGCATGGCAAGACTTGCAACATCTTCTTTTGACAAAAC
TGTCAGGGTTTGGGATGCTGACAATCCGGGCTACTCACTTCGGACTTTCACTGGGCATTCTGCTGGTGTAATGTCACTCGACTTCCATCCTAATAAAGAA
GATCTCATCTGTTCTTGTGATGGTGATGGTGAAATAAGATACTGGAGTATTAACAATGGTAGCTGCACAAGGGTGTTCAAGGGTGGGACGGCTCAGGTGA
GATTCCAGCCTCGCATTGGTAGATATCTCGCTGCTGCTGCCGAGAACGTTGTATCAATACTTGACGTGGAGACACAAGCTTGTCGGCATTCGTTAAAGGG
CCACACGAAACCAATCCATTCTGTCTGCTGGGATCCCTCAGGCGAGCTCCTCGCATCTGTTAGTGAAGACTCTGTCAGGGTTTGGACATTGAGATCGGGT
AGTGAAGGTGACTGTCTACATGAGCTTAGTTCAAATGGCAACAAATTCCACTCGTGTGTTTTCCACCCTGCATATTCGTCGTTGCTAGTTATCGGCTGTT
ACCAGTCTTTGGAGCTATGGAACATGAATGAGAACAAGACAATGACTCTCACAGGCCATGAAGGATTAATTGCTTCCTTGGCTGTATCGGGAGTCGCGGG
TTTGGTTGCTTCAGCTAGTCATGACAAGTTTGTTAAGCTCTGGAAGTAATATGTTCCATCCATGGTTTCCTTTTGGAACCCATGTTTTATGTCCACTGTA
AAATATTTTATTGGTGTCTGAAGAGATACTTGTGTCTGTCTTATCTAGCATTAGGCTTTGTGTTCTGTTATTTTTTTTTCCCCCATTTATGCCTGAAAGA
TCCATGTACTAACCCCATCCTCTGCTCATCTTGACTACTGGTACTTAACTTTACCTTATTAAAACCTAAAAGAAGAAAATTTGCTGTTGAGTTGATGCTA
TGTTTTTTTCCCTCTCCACAAATGGCTATGTCAGTTGGAATGATCAAAGTGTAATGCCACTGATGCAACACAAG