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Detailed information on CNT0039900


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005102, E-value = 3e-08 (V. vinifera)
CNT0028845, E-value = 7e-12 (O. sativa)
CNT0035759, E-value = 5e-13 (C. reinhardtii)

Expression of CNT0039900

ERR364347: 0.707 RPKM

Peptides detected in this lncRNA

>peptide 1 (33 aa)
GICSHVIRLTVGERETSYLAFDQIVSPNCCYPT*

Sequence

>CNT0039900
GAGGAATTTGCAGTCACGTAATACGTCTTACTGTAGGTGAGAGGGAGACGAGCTACCTAGCTTTTGATCAGATCGTCTCTCCAAACTGTTGCTATCCTAC
ATAGAGGTGCACAGATGATGAACATGAGGAGAAAGAGGATCAAGGTTTTCTTTCTTTTTAAGTAGTGCGAAGATCTTTACTGGAGTATCGCGGCAAATCC
CAGAAACTTCCAGCTTTTCAAAGAACGGAGCCAGTGAGACAGAGACCAAGCACAGACCAGACTGGGAGGATGAGGTAGTAACACCAACAACAACATCCAT
AAGAACAAGGTGTGTGAATCGAGCCCGGGCTTTAGTGGCGTAGAGGAGGTACTAGAAAGCAAAGCTGGACTGGGAAATTTTTGGAAGAACACAGGGAATA
GGAAGTGGACAGGGCACGTACGAGCGGGAGGAATACAGCTGGTCTGTAGCAGCATGAATGGTTTTTATTTGGAGTGATTTGGATTCGCCAGACAGCTAGC
AAAAGGGAAAGGCTCGATCTTCAATGCTCGGAAAAGGAACTACTTGGGGGACCCTGGCACAGTGGTGCTGGTGCTGCTGATGGTGGTGGTGGTGGTGGTG
GTGGTGGTGGTCACTGGTGGTGG