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Detailed information on CNT0044717


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9C8X7|UBC31_ARATH, E-value = 3e-39

BLAST vs NONCODE (A. thaliana):
NONATHT000343, E-value = 0.0

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0011416, E-value = 3e-08 (S. tuberosum)

Expression of CNT0044717

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MILLYLKLDNFSRITDSSLIRELGNSPSDML

>peptide 2 (38 aa)
MIQGPNGTPYASGIFRLDIEFPEDYPFKPPKVCYLLQI*

>peptide 3 (72 aa)
MTYFLTVHSKLRFTIQISSPADRFALTFLKTSGLLLSLLKRFKKLIHKSNILFYVVYFVLSHSIKRIFILVN*

Sequence

>CNT0044717
AAACTTGATTATCTAGTGTATGATGTGCTAAAAATAAAAAATAAAAGAGAAGTATCACAATAGGTAAAGACGACGACTCAAACAATGTATTCAAATGAAA
AACAATGATTCAAGGTCCCAACGGTACTCCCTACGCCAGTGGTATATTTCGCCTCGACATTGAGTTTCCTGAAGATTATCCTTTTAAACCACCCAAGGTT
TGTTACCTACTACAAATTTGAAAGGTTAATTTTGTTGTTTACAATATAAATACGTTTTATGACTTATTTTTTAACAGTACATTCAAAACTCCGATTTACC
ATTCAAATATCAAGTCCAGCGGATCGATTTGCATTGACATTCTTAAAGACAAGTGGACTCCTTCTCTCACTGTTGAAAAGGTTCAAAAAATTGATTCATA
AATCAAATATTTTGTTTTATGTTGTTTATTTTGTTCTTTCTCATTCTATTAAAAGGATTTTCATTCTTGTTAATTAAGAGTTAATAAATAAATCACATGT
GCTTTTATCCATAACTGTATTATTGGCGGATCCAAACCCAAATGATCCTCTTGTACCTGAAATTGGACAACTTTTCAAGAATAACAGATTCCAGTTTGAT
TAGAGAGCTCGGGAATTCACCGAGCGACATGCTTGT