Detailed information on CNT0000479 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0022403, E-value = 3e-13 (A. trichopoda)

Expression of CNT0000479

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LHLILCEYQNQNLTLLAYCHKRRSNKEASQVVC*

>peptide 2 (38 aa)
FILYYASTKIKTLPYSRIAINDGRIKKRVKWCVELSVR*

>peptide 3 (77 aa)
MAQSCNQGLLLWNESRLQWVGSGKSRKHGQQKREPRLNWNATYESLLGTRQPFPKPIPLSEMVEFLVDVWEREGMYG*

>peptide 4 (36 aa)
MQKLLLFKAVTMHLYESGPCLDCHFLGSLHDVAGGS*

>peptide 5 (40 aa)
MQLMKVCLELDNLSPSPYLYLKWLNSWWMFGSVKGCMVET*

>peptide 6 (47 aa)
MVSGVQALVIWITATFNLREVSRLSVHQIKFSIIAVELLPQGPILNL*

>peptide 7 (43 aa)
MMYLTPERFSCIVVQRRLKDQTQVCSPFVISNTKGNPFVFALL*

>peptide 8 (37 aa)
MSQVLVWTVTSSDLSMMWLEVVRHLFFLLNMFSVLTL*

Sequence

>CNT0000479
CTTCATCTTATATTATGCGAGTACCAAAATCAAAACCTTACCTTACTCGCGTATTGCCATAAACGACGGTCGAATAAAGAAGCGAGTCAAGTGGTGTGTT
GAGTTAAGCGTCCGTTAAACGACAGACAGCGACAGTAGTGCAGCAGACACGATAAAAATAAAAAAAGCTCCAAAATTCTATGTGGTGGTGGAGATGGTGA
TGATTACTGCTTGGATCACTGACCTTTTCGCTTGTATGGGAACAGTGGTTGTTTTGGATGCTGTGTGAAACCCACACCAATTATTGCCGTGGATGAGCCA
GCAAAGGGACTAAGAATTCAGGGGCAGACAGTAAGAAAACCACACATATCAGATGGTTTCTGGAGTTCAAGCACTTGTGATCTGGATAACAGCAACATTC
AATCTCAGAGAAGTATCTCGTCTGTCAGTACATCAAATCAAATTCTCTATCATAGCGGTGGAACTTCTACCCCAGGGGCCAATCCTGAATTTGTAAACCC
AGGCAAGTTCTATATTGGTTTTTGCTATTCTTCCTATTAATTAATATTGGAATGTTCATCTATACTTTTAGCAAATCATAAGTTTGTTTGTTTGTTTTTT
CTTTTTTGGGTAATATAACAATGCCCCCAAAGGGAGCTTGATAGGGAAGGGAAAGTTGACAAGTGGGGGATTAAACTCCATCCCATATGGCCCAATCATG
TAACCAAGGCCTTCTTCTCTGGAATGAGAGCAGGCTTCAGTGGGTTGGAAGTGGCAAATCTAGGAAGCATGGCCAACAAAAAAGAGAACCCAGACTAAAT
TGGAATGCAACTTATGAAAGTTTGCTTGGAACTAGACAACCTTTCCCCAAGCCCATACCTTTATCTGAAATGGTTGAATTCCTGGTGGATGTTTGGGAGC
GTGAAGGGATGTATGGTTGAAACTTGATAGGTTAAAATGCTGAGTGCCTTCAAGTTTGTTTATACTTTCAATGATGTATTTGACTCCTGAAAGGTTTTCA
TGTATAGTTGTGCAGAGAAGATTAAAAGATCAAACACAAGTTTGTTCTCCCTTTGTAATTTCAAACACTAAAGGCAATCCTTTTGTTTTTGCCCTCCTGT
AAATGACTGTATATCATTTTCAAACTATAATCTGAATTGCTGAATGCAGAAGTTGTTACTTTTTAAGGCTGTAACTATGCATTTATATGAGTCAGGTCCT
TGTCTGGACTGTCACTTCCTCGGATCTCTCCATGATGTGGCTGGAGGTAGTTAGGCATCTATTCTTCCTATTGAATATGTTTTCAGTGCTAACTCTTTAG
AGTTGCCCGTTCTTGATTCATTTTCCATTTACTCCT