Detailed information on CNT0001084 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P49076|ARF_MAIZE, E-value = 5e-20

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0044865, E-value = 1e-17 (A. thaliana)

Expression of CNT0001084

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MGLTFTKLFSRLFAKKEMRILMVGLDVAGKTTILYKLKLAEIVTIIPTIDNV*

>peptide 2 (55 aa)
MRSHRRKPIEEALCSVSYSMKNFCNSKILCFFSPFRAFFSFVFRLFQNPQIMLLL*

>peptide 3 (98 aa)
MFCFLQYEKFLQFKNFMFLLSISRFLFLCVSAVSKSTNYASPLASSACHFTRQTYEAFKKFHLSSRPLPLPLMMSFSNLNLNGLIMRVWNRVVPPALF*

>peptide 4 (33 aa)
HTCFISRFLPFFYFKIHVFFFFSHYLHILVLHL*

>peptide 5 (46 aa)
YMFHLALSSFFLFQNPCFLLLLALPTHTSSTPLSYQIYEITSPKAH*

>peptide 6 (55 aa)
MSEIQNPIHMEFGRNLRGKNGLICESVLMELKEFVSMCGGPNEKLRADRLINCLR*

Sequence

>CNT0001084
CATACATGTTTCATCTCGCGCTTTCTTCCTTTTTTTTATTTCAAAATCCATGTTTTCTTCTTCTTCTCGCACTACCTACACATACTAGTTCTACACCTTT
GAGCTACCAAATTTATGAGATCACATCGCCGAAAGCCCATTGAAGAAGCACTATGTTCTGTTTCTTACAGTATGAAAAATTTTTGCAATTCAAAAATTTT
ATGTTTCTTCTCTCCATTTCGCGCTTTCTTTTCCTTTGTGTTTCGGCTGTTTCAAAATCCACAAATTATGCTTCTCCTCTAGCTAGCTCAGCTTGTCATT
TCACACGCCAAACCTATGAGGCTTTTAAAAAATTTCATCTTTCTTCCAGGCCTCTTCCTCTTCCTCTTATGATGAGCTTTTCAAATTTGAATTTAAATGG
CCTCATAATGAGGGTTTGGAATCGAGTTGTACCGCCCGCTTTGTTTTGAGCTCCGTTGTCATTGACTTCTTGCCGCTCCACCTCTCACCGCTCTGATCCC
GCCGCCACAAATCCTTCCTCATTTCCTGTGATTCCTCCTGCCACAAATCTACCTCTGGTGACTCTCACAGAGCCAACAACAACAACAACGATTATCTCGA
AGCTTCTCTCCTTCTCTCAAGCCTCATTTGCACAAGGATCCACTAGTTGAAGGAGAAATGGGGCTGACATTCACAAAGCTTTTCAGCCGACTTTTCGCGA
AGAAGGAAATGCGAATTTTGATGGTTGGTCTTGATGTTGCTGGTAAGACCACTATCCTCTACAAGCTCAAGCTTGCAGAGATCGTTACTATAATTCCTAC
CATTGATAATGTCTGAAATTCAAAACCCAATCCATATGGAATTTGGTAGGAACCTTCGAGGGAAGAATGGCCTAATTTGTGAGAGTGTTCTTATGGAATT
GAAGGAGTTCGTATCAATGTGTGGAGGGCCCAATGAGAAACTGAGAGCTGACAGGTTGATAAATTGCCTCAGGTGAGTTTAATCTATGTTTGTTTGTTTG
TCTGCAAAAAGAAAGAAAATTATTTTGTTGTTGCTAGGTTGTTAACTATGCTAAATAAATGTATCCAGGCC