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Found 2569 records in
Amborella trichopoda

CPC status:   #
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Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0022922 A. trichopoda AmTr_v1.0_scaffold00045:3728792-3735573 (+) noncoding (-0.612484)0.00000000001 (sp|B1LBM4|RL18_THESQ) 114 22.154 Confident lncRNA
CNT0022921 A. trichopoda AmTr_v1.0_scaffold00045:4311133-4325740 (+) noncoding (-0.976738)- 62 12.098 Confident lncRNA
CNT0022920 A. trichopoda AmTr_v1.0_scaffold00045:191439-193794 (+) noncoding (-1.16127)- 97 9.414 Confident lncRNA
CNT0022919 A. trichopoda AmTr_v1.0_scaffold00045:1062869-1071884 (+) noncoding (-1.11147)4e-23 (sp|P46270|QCR9_SOLTU) 70 52.258 Low-confidence lncRNA
CNT0022918 A. trichopoda AmTr_v1.0_scaffold00045:3698578-3704431 (-) noncoding (-0.75901)7e-43 (sp|Q3E902|RS212_ARATH) 81 125.26 Low-confidence lncRNA
CNT0022917 A. trichopoda AmTr_v1.0_scaffold00045:4719489-4744495 (+) noncoding (-0.0115843)- 346 32.417 Confident lncRNA
CNT0022916 A. trichopoda AmTr_v1.0_scaffold00045:4696188-4698612 (+) noncoding (-1.02131)- 41 0 Confident lncRNA
CNT0022915 A. trichopoda AmTr_v1.0_scaffold00045:1560443-1564758 (-) noncoding (-0.984747)- 95 20.993 Confident lncRNA
CNT0022914 A. trichopoda AmTr_v1.0_scaffold00042:2293740-2301856 (-) noncoding (-0.0275949)8e-33 (sp|O95372|LYPA2_HUMAN) 296 188.416 Low-confidence lncRNA
CNT0022913 A. trichopoda AmTr_v1.0_scaffold00042:2293740-2301856 (-) noncoding (-0.107088)1e-32 (sp|O95372|LYPA2_HUMAN) 257 153.876 Low-confidence lncRNA
CNT0022912 A. trichopoda AmTr_v1.0_scaffold00042:4028965-4038062 (-) noncoding (-1.06705)- 73 11.75 Confident lncRNA
CNT0022911 A. trichopoda AmTr_v1.0_scaffold00042:4014357-4018186 (-) coding (0.17543)- 399 3.921 Confident lncRNA
CNT0022910 A. trichopoda AmTr_v1.0_scaffold00042:4028965-4038062 (-) noncoding (-1.16933)- 59 8.368 Confident lncRNA
CNT0022909 A. trichopoda AmTr_v1.0_scaffold00042:2016891-2018667 (+) coding (0.27465)5e-17 (sp|Q9SY66|FRS11_ARATH) 109 6.391 Confident lncRNA
CNT0022908 A. trichopoda AmTr_v1.0_scaffold00044:3141590-3216139 (+) coding (1.15064)0 (sp|F4IBD7|CSCLA_ARATH) 475 6.159 Low-confidence lncRNA
CNT0022907 A. trichopoda AmTr_v1.0_scaffold00044:2923853-2947145 (+) noncoding (-0.749674)- 175 2.521 Confident lncRNA
CNT0022906 A. trichopoda AmTr_v1.0_scaffold00044:3735383-3735609 (+) noncoding (-1.17499)6e-20 (sp|Q9FYA6|BCAT5_ARATH) 66 0 splicing regulationConfident lncRNA
CNT0022905 A. trichopoda AmTr_v1.0_scaffold00044:1237239-1245594 (+) noncoding (-0.228483)- 119 47.759 Confident lncRNA
CNT0022904 A. trichopoda AmTr_v1.0_scaffold00044:4179827-4191096 (-) noncoding (-1.41025)0.00000000000004 (sp|A2XBN5|NLTPX_ORYSI) 66 37.917 Confident lncRNA
CNT0022903 A. trichopoda AmTr_v1.0_scaffold00044:273665-274885 (-) noncoding (-1.18859)- 33 0 Confident lncRNA
CNT0022902 A. trichopoda AmTr_v1.0_scaffold00044:309541-312791 (-) noncoding (-0.946582)- 67 3.463 Confident lncRNA
CNT0022901 A. trichopoda AmTr_v1.0_scaffold00044:3082989-3104439 (-) coding (0.0797563)0.00000000007 (sp|Q9UTS8|YI7B_SCHPO) 440 5.29 Confident lncRNA
CNT0022900 A. trichopoda AmTr_v1.0_scaffold00044:2067071-2071172 (+) coding (0.665598)5e-140 (sp|Q9FII2|FK117_ARATH) 647 5.544 Low-confidence lncRNA
CNT0022899 A. trichopoda AmTr_v1.0_scaffold00044:983386-988599 (-) coding (0.0773773)- 245 11.019 Confident lncRNA
CNT0022898 A. trichopoda AmTr_v1.0_scaffold00044:981566-988599 (-) coding (0.30027)0.000004 (sp|B1Y787|DNAJ_LEPCP) 266 11.808 Confident lncRNA
CNT0022897 A. trichopoda AmTr_v1.0_scaffold00044:4931736-4967440 (+) noncoding (-0.682252)5e-102 (sp|Q5N9Q7|PTHM_ORYSJ) 238 14.904 Low-confidence lncRNA
CNT0022896 A. trichopoda AmTr_v1.0_scaffold00044:1849471-1864506 (-) coding (0.354074)3e-51 (sp|Q9CYU6|DPH7_MOUSE) 345 16.164 Low-confidence lncRNA
CNT0022895 A. trichopoda AmTr_v1.0_scaffold00044:1849471-1864506 (-) coding (0.327397)2e-51 (sp|Q9CYU6|DPH7_MOUSE) 354 15.491 Low-confidence lncRNA
CNT0022894 A. trichopoda AmTr_v1.0_scaffold00044:1515763-1517861 (+) noncoding (-0.835892)0.00000000000004 (sp|Q9FKY5|MLO10_ARATH) 134 83.383 Confident lncRNA
CNT0022893 A. trichopoda AmTr_v1.0_scaffold00044:946590-955375 (-) coding (0.0721852)3e-99 (sp|P93740|NUD23_ARATH) 318 12.38 Low-confidence lncRNA
CNT0022892 A. trichopoda AmTr_v1.0_scaffold00044:2305905-2306635 (-) noncoding (-1.16033)- - 2.26 Confident lncRNA
CNT0022891 A. trichopoda AmTr_v1.0_scaffold00044:1349210-1357537 (-) coding (0.168767)2e-140 (sp|Q7DNC3|MPCP1_ARATH) 329 11.722 Low-confidence lncRNA
CNT0022890 A. trichopoda AmTr_v1.0_scaffold00044:597896-603015 (+) coding (0.206031)2e-24 (sp|P46302|RS28_MAIZE) 65 131.323 Low-confidence lncRNA
CNT0022889 A. trichopoda AmTr_v1.0_scaffold00044:1273146-1277937 (-) noncoding (-1.12718)- 106 35.321 Confident lncRNA
CNT0022888 A. trichopoda AmTr_v1.0_scaffold00043:4137526-4143041 (+) noncoding (-1.04167)2e-19 (sp|Q9SJW9|CDT1A_ARATH) 56 9.626 Confident lncRNA
CNT0022887 A. trichopoda AmTr_v1.0_scaffold00043:3986252-3987473 (-) coding (0.0790103)0.0000000002 (sp|Q42777|MCCA_SOYBN) 72 4.165 Confident lncRNA
CNT0022886 A. trichopoda AmTr_v1.0_scaffold00043:2759041-2777200 (-) noncoding (-0.497196)0.00000000000005 (sp|Q9FNR1|RBG3_ARATH) 130 199.615 Confident lncRNA
CNT0022885 A. trichopoda AmTr_v1.0_scaffold00043:2759041-2777200 (-) noncoding (-0.941215)0.00000000001 (sp|Q9FNR1|RBG3_ARATH) 67 161.681 Confident lncRNA
CNT0022884 A. trichopoda AmTr_v1.0_scaffold00043:2196681-2199581 (-) noncoding (-1.13155)- 49 6.538 Confident lncRNA
CNT0022883 A. trichopoda AmTr_v1.0_scaffold00049:2076049-2095757 (-) coding (0.608509)- 536 2.649 Confident lncRNA
CNT0022882 A. trichopoda AmTr_v1.0_scaffold00049:3576964-3579688 (-) noncoding (-0.946724)- 113 16.551 Confident lncRNA
CNT0022881 A. trichopoda AmTr_v1.0_scaffold00049:1313475-1317914 (+) noncoding (-0.746854)0.000000002 (sp|P0C2F6|RNHX1_ARATH) 212 7.585 Confident lncRNA
CNT0022880 A. trichopoda AmTr_v1.0_scaffold00049:2928073-2936368 (-) noncoding (-0.811018)3e-63 (sp|Q8H1F2|RGS1_ARATH) 218 5.582 Confident lncRNA
CNT0022879 A. trichopoda AmTr_v1.0_scaffold00049:4664213-4677680 (+) noncoding (-0.445389)2e-27 (sp|Q5JME8|DI195_ORYSJ) 214 434.187 Low-confidence lncRNA
CNT0022878 A. trichopoda AmTr_v1.0_scaffold00049:3377496-3387883 (+) coding (0.240629)2e-32 (sp|Q8N5I4|DHRSX_HUMAN) 372 6.119 Low-confidence lncRNA
CNT0022877 A. trichopoda AmTr_v1.0_scaffold00049:3539254-3548446 (+) noncoding (-0.584053)8e-18 (sp|P38389|SC61B_ARATH) 92 42.079 splicing regulationConfident lncRNA
CNT0022876 A. trichopoda AmTr_v1.0_scaffold00049:898887-905496 (+) noncoding (-1.00343)- 66 2.741 Confident lncRNA
CNT0022875 A. trichopoda AmTr_v1.0_scaffold00049:4006544-4008754 (+) noncoding (-0.0482748)- 222 52.637 Confident lncRNA
CNT0022874 A. trichopoda AmTr_v1.0_scaffold00049:2986228-2992279 (+) noncoding (-0.596453)0.0000000005 (sp|Q8GYN5|RIN4_ARATH) 112 125.543 Confident lncRNA
CNT0022873 A. trichopoda AmTr_v1.0_scaffold00049:1412266-1419913 (-) noncoding (-0.382953)2e-22 (sp|O32107|YUID_BACSU) 165 9.13 Confident lncRNA