SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0017098 S. tuberosum 1:76492978-76495574 (+) noncoding (-0.301615)- 207 20.729 Confident lncRNA
CNT0017097 S. tuberosum 1:76181196-76183482 (-) noncoding (-0.606517)4e-16 (sp|F4JN26|MLH3_ARATH) 115 0.254 Confident lncRNA
CNT0017096 S. tuberosum 1:1968901-1980123 (+) noncoding (-1.14208)- 51 0.183 Confident lncRNA
CNT0017095 S. tuberosum 1:17681887-17794464 (-) coding (1.3468)9e-128 (sp|I7C6E8|C7A52_PANGI) 430 7.804 Low-confidence lncRNA
CNT0017094 S. tuberosum 1:65573946-65591250 (-) noncoding (-1.21326)- 45 0 Confident lncRNA
CNT0017093 S. tuberosum 1:65569946-65628128 (-) noncoding (-0.993502)- 61 0.663 Confident lncRNA
CNT0017092 S. tuberosum 1:65569946-65570647 (-) noncoding (-1.28981)- 49 1.332 Confident lncRNA
CNT0017091 S. tuberosum 1:3764422-3771009 (-) coding (4.50214)0 (sp|Q9C5X9|HAC1_ARATH) 319 37.921 Low-confidence lncRNA
CNT0017090 S. tuberosum 1:61290365-61290749 (+) coding (0.707354)2e-31 (sp|P50651|RIR2A_ARATH) 71 0 Confident lncRNA
CNT0017089 S. tuberosum 1:152322-153473 (-) noncoding (-1.31369)2e-25 (sp|O65740|DEF2_CAPAN) 71 2.343 Low-confidence lncRNA
CNT0017088 S. tuberosum 1:57064163-57065464 (+) coding (0.604958)2e-16 (sp|Q9LHP4|RCH2_ARATH) 90 1.008 Confident lncRNA
CNT0017087 S. tuberosum 1:88612416-88612951 (+) noncoding (-1.17036)- 39 1.077 splicing regulationConfident lncRNA
CNT0017086 S. tuberosum 1:152322-153487 (-) noncoding (-1.10592)5e-25 (sp|O65740|DEF2_CAPAN) 52 1.493 Confident lncRNA
CNT0017085 S. tuberosum 1:44395115-44396629 (-) noncoding (-0.151239)- 212 4.012 Confident lncRNA
CNT0017084 S. tuberosum 1:44378722-44387896 (-) coding (0.161857)1e-163 (sp|Q5PNU3|AMSH3_ARATH) 259 26.489 Low-confidence lncRNA
CNT0017083 S. tuberosum 1:72986329-72987866 (+) noncoding (-1.04694)- 38 0 Confident lncRNA
CNT0017082 S. tuberosum 1:72986084-72987694 (+) noncoding (-0.352726)- 87 0.736 Confident lncRNA
CNT0017081 S. tuberosum 1:78520140-78520356 (-) noncoding (-1.20518)1e-16 (sp|Q8GXB4|WTR2_ARATH) - 0 Confident lncRNA
CNT0017080 S. tuberosum 1:68088727-68089117 (-) noncoding (-0.761674)- 76 38.155 Confident lncRNA
CNT0017079 S. tuberosum 1:63109066-63150588 (-) noncoding (-1.03429)0.000004 (sp|Q9LNF4|P2C13_ARATH) 38 0 Confident lncRNA
CNT0017078 S. tuberosum 1:76959523-76976145 (-) noncoding (-1.28548)1e-171 (sp|Q43191|LOX15_SOLTU) 48 0.349 splicing regulationConfident lncRNA
CNT0017077 S. tuberosum 1:77514904-77523016 (+) noncoding (-0.297975)- 279 66.268 Confident lncRNA
CNT0017076 S. tuberosum 1:7854986-7861769 (-) noncoding (-0.695441)0.000007 (sp|Q42546|DPNP1_ARATH) 92 15.886 Confident lncRNA
CNT0017075 S. tuberosum 1:70430251-70433163 (-) coding (0.967922)- 452 2.265 Confident lncRNA
CNT0017074 S. tuberosum 1:4380102-4527282 (+) noncoding (-0.789901)6e-27 (sp|Q682D3|XRCC2_ARATH) 187 2.19 Low-confidence lncRNA
CNT0017073 S. tuberosum 1:4382016-4385740 (+) noncoding (-1.17242)- 98 5.651 Confident lncRNA
CNT0017072 S. tuberosum 1:4382016-4527282 (+) noncoding (-1.12732)0.000001 (sp|Q682D3|XRCC2_ARATH) 100 1.356 Confident lncRNA
CNT0017071 S. tuberosum 1:4372018-4535052 (+) noncoding (-0.745599)0.000000000000003 (sp|B3EWI4|PST2_PETHY) 44 0 Confident lncRNA
CNT0017070 S. tuberosum 1:4372020-4372626 (+) noncoding (-1.21209)0.0000002 (sp|P31336|PST2_GOSHI) 41 11.447 Confident lncRNA
CNT0017069 S. tuberosum 1:4382019-4590745 (+) noncoding (-1.26354)- 76 0.852 Confident lncRNA
CNT0017068 S. tuberosum 1:4382020-4527282 (+) noncoding (-1.16896)- 97 5.343 Confident lncRNA
CNT0017067 S. tuberosum 1:65556104-65570511 (+) coding (1.12043)1e-25 (sp|Q8NEZ4|KMT2C_HUMAN) 310 6.949 Confident lncRNA
CNT0017066 S. tuberosum 1:82363259-82383368 (+) noncoding (-1.02582)- 97 0 Confident lncRNA
CNT0017065 S. tuberosum 1:82363259-82383368 (+) noncoding (-1.22085)- 73 39.536 Confident lncRNA
CNT0017064 S. tuberosum 1:82338498-82339147 (+) noncoding (-1.01493)- 43 47.412 Confident lncRNA
CNT0017063 S. tuberosum 1:82360590-82383368 (+) noncoding (-1.11315)- 71 40.639 Confident lncRNA
CNT0017062 S. tuberosum 1:82360590-82383368 (+) noncoding (-1.11315)- 71 40.639 Confident lncRNA
CNT0017061 S. tuberosum 1:1968901-1980123 (+) noncoding (-1.1498)- 53 0.182 Confident lncRNA
CNT0017060 S. tuberosum 1:1969235-1980123 (+) noncoding (-0.691895)- 65 0 Confident lncRNA
CNT0017059 S. tuberosum 1:72373108-72375306 (-) noncoding (-0.0930612)1e-47 (sp|Q9LDD4|ARID2_ARATH) 264 7.936 Low-confidence lncRNA
CNT0017058 S. tuberosum 1:72367512-72370872 (-) noncoding (-0.829942)4e-38 (sp|P42748|UBC4_ARATH) 84 14.013 Confident lncRNA
CNT0017057 S. tuberosum 1:32205901-32237234 (-) coding (1.06268)- 535 18.27 Confident lncRNA
CNT0017056 S. tuberosum 1:32233143-32237204 (-) noncoding (-1.04569)- 74 2.206 Confident lncRNA
CNT0017055 S. tuberosum 1:83228725-83231174 (-) noncoding (-0.500364)2e-19 (sp|Q9C6C3|AGD2_ARATH) 141 0 Confident lncRNA
CNT0017054 S. tuberosum 1:62613306-62615793 (+) noncoding (-0.968699)- 126 0.407 Confident lncRNA
CNT0017053 S. tuberosum 1:6959474-7007933 (-) noncoding (-0.865464)0.0000000005 (sp|Q9C9H7|RLP12_ARATH) 132 16.231 Confident lncRNA
CNT0017052 S. tuberosum 1:74052122-74052342 (-) noncoding (-1.03112)- 55 0 Confident lncRNA
CNT0017051 S. tuberosum 1:24596983-24601127 (+) noncoding (-0.0166905)1e-17 (sp|P49690|RL23_ARATH) 66 0.136 Confident lncRNA
CNT0017050 S. tuberosum 1:80297394-80304550 (-) coding (2.97702)2e-66 (sp|Q93YR2|BASS1_ARATH) 406 14.038 splicing regulationLow-confidence lncRNA
CNT0017049 S. tuberosum 1:80297394-80302478 (-) coding (2.79873)2e-65 (sp|Q93YR2|BASS1_ARATH) 411 13.987 splicing regulationLow-confidence lncRNA