SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0016998 S. tuberosum 1:1354290-1354771 (+) coding (0.211231)1e-22 (sp|Q9C9H7|RLP12_ARATH) 160 0 Confident lncRNA
CNT0016997 S. tuberosum 1:1352804-1355576 (+) noncoding (-0.850665)- 68 0 Confident lncRNA
CNT0016996 S. tuberosum 1:1359426-1372343 (+) coding (1.22421)1e-93 (sp|Q9C9H7|RLP12_ARATH) 576 0 Low-confidence lncRNA
CNT0016995 S. tuberosum 1:1359420-1362227 (+) coding (3.39343)3e-93 (sp|Q9C9H7|RLP12_ARATH) 576 0 Low-confidence lncRNA
CNT0016994 S. tuberosum 1:72140989-72142622 (-) noncoding (-1.21593)- 58 3.721 Confident lncRNA
CNT0016993 S. tuberosum 1:65118729-65121646 (-) noncoding (-0.744564)- 125 0 Confident lncRNA
CNT0016992 S. tuberosum 1:65162327-65163352 (-) noncoding (-0.988063)- 108 0 Confident lncRNA
CNT0016991 S. tuberosum 1:87820350-87820985 (-) noncoding (-1.20365)- 49 1.553 Confident lncRNA
CNT0016990 S. tuberosum 1:87821821-87824905 (-) noncoding (-1.03759)- 93 0 Confident lncRNA
CNT0016989 S. tuberosum 1:1200291-1201173 (-) noncoding (-1.24715)0.00000000001 (sp|Q54EW3|IPO5_DICDI) 87 0 Confident lncRNA
CNT0016988 S. tuberosum 1:27845049-27847413 (-) noncoding (-1.05142)- 31 0 Confident lncRNA
CNT0016987 S. tuberosum 1:11234020-11301632 (-) coding (0.486389)- 161 0 Confident lncRNA
CNT0016986 S. tuberosum 1:35921505-35922033 (-) noncoding (-1.00362)- 51 0.524 Confident lncRNA
CNT0016985 S. tuberosum 1:35972422-35978578 (-) noncoding (-1.31122)- 37 10.427 Confident lncRNA
CNT0016984 S. tuberosum 1:8501646-8502028 (+) noncoding (-1.07704)- 41 1.528 splicing regulationConfident lncRNA
CNT0016983 S. tuberosum 1:8168902-8171518 (+) noncoding (-1.19136)- 41 0 Confident lncRNA
CNT0016982 S. tuberosum 1:8168226-8171518 (+) noncoding (-1.19136)- 41 0 Confident lncRNA
CNT0016981 S. tuberosum 1:78278183-78279268 (-) noncoding (-1.35664)- 39 0 splicing regulationConfident lncRNA
CNT0016980 S. tuberosum 1:3690775-3694788 (+) noncoding (-0.972522)- 149 3.6 Confident lncRNA
CNT0016979 S. tuberosum 1:3691586-3694788 (+) noncoding (-0.440171)- 149 4.784 Confident lncRNA
CNT0016978 S. tuberosum 1:45392231-45422134 (-) noncoding (-0.488993)- 213 4.996 Confident lncRNA
CNT0016977 S. tuberosum 1:81190564-81215907 (-) noncoding (-0.877899)- 113 2.94 Confident lncRNA
CNT0016976 S. tuberosum 1:81190564-81194272 (-) noncoding (-1.33668)- 85 5.924 splicing regulationConfident lncRNA
CNT0016975 S. tuberosum 1:84107990-84108853 (-) noncoding (-1.17603)- 70 0.226 Confident lncRNA
CNT0016974 S. tuberosum 1:81190564-81194153 (-) noncoding (-1.33521)- 85 6.186 splicing regulationConfident lncRNA
CNT0016973 S. tuberosum 1:77612333-77615421 (-) noncoding (-0.39984)5e-68 (sp|Q10LN5|SWT16_ORYSJ) 198 11.54 Low-confidence lncRNA
CNT0016972 S. tuberosum 1:81165443-81166494 (-) noncoding (-0.925064)- 58 0.179 splicing regulationConfident lncRNA
CNT0016971 S. tuberosum 1:11274687-11301760 (-) coding (0.624779)- 204 6.649 Confident lncRNA
CNT0016970 S. tuberosum 1:81239239-81241334 (+) coding (1.71448)5e-34 (sp|Q5IBC5|ESP1_ARATH) 236 12.306 Confident lncRNA
CNT0016969 S. tuberosum 1:81242606-81248089 (+) coding (2.15356)2e-45 (sp|Q5IBC5|ESP1_ARATH) 376 1.989 Low-confidence lncRNA
CNT0016968 S. tuberosum 1:75530548-75532330 (+) coding (0.936189)6e-34 (sp|Q9SS17|RS241_ARATH) 79 206.875 Confident lncRNA
CNT0016967 S. tuberosum 1:4725853-4739994 (+) coding (0.684237)0 (sp|Q01412|E13A_SOLLC) 336 432.241 Low-confidence lncRNA
CNT0016966 S. tuberosum 1:4725760-4739994 (+) coding (0.586224)0 (sp|Q01412|E13A_SOLLC) 301 283.259 Low-confidence lncRNA
CNT0016965 S. tuberosum 1:52459391-52463611 (-) noncoding (-0.966859)- 93 0 Confident lncRNA
CNT0016964 S. tuberosum 1:52404958-52407741 (-) noncoding (-1.15873)- - 3.26 Confident lncRNA
CNT0016963 S. tuberosum 1:65302241-65309016 (+) coding (4.82796)1e-76 (sp|P54802|ANAG_HUMAN) 332 18.683 Low-confidence lncRNA
CNT0016962 S. tuberosum 1:32085100-32096627 (+) coding (1.38427)9e-149 (sp|Q9M903|TGD4_ARATH) 466 8.236 Low-confidence lncRNA
CNT0016961 S. tuberosum 1:67625453-67629205 (+) noncoding (-0.789331)- 86 8.173 Confident lncRNA
CNT0016960 S. tuberosum 1:67625453-67629205 (+) noncoding (-0.702322)- 114 3.194 splicing regulationConfident lncRNA
CNT0016959 S. tuberosum 1:8486747-8493152 (-) noncoding (-1.19895)- 42 0.414 Confident lncRNA
CNT0016958 S. tuberosum 1:43576818-43581621 (+) coding (0.891405)0 (sp|Q9ZQ89|UPS2_ARATH) 407 20.535 Low-confidence lncRNA
CNT0016957 S. tuberosum 1:73237104-73244176 (-) noncoding (-0.752635)2e-39 (sp|Q8RVQ9|HTR12_ARATH) 155 8.729 Low-confidence lncRNA
CNT0016956 S. tuberosum 1:72456114-72477975 (-) coding (6.56441)0 (sp|P92949|FRO2_ARATH) 713 13.738 Low-confidence lncRNA
CNT0016955 S. tuberosum 1:20121854-20122846 (-) noncoding (-0.637225)0.000002 (sp|Q40134|RAD51_SOLLC) 39 0.304 Confident lncRNA
CNT0016954 S. tuberosum 1:20116965-20118648 (-) noncoding (-1.06678)- 76 0 Confident lncRNA
CNT0016953 S. tuberosum 1:12664881-12667072 (-) noncoding (-0.0357834)3e-45 (sp|Q39128|KAT1_ARATH) 178 3.739 Low-confidence lncRNA
CNT0016952 S. tuberosum 1:12664881-12667072 (-) coding (0.0906647)4e-45 (sp|Q39128|KAT1_ARATH) 259 3.913 Low-confidence lncRNA
CNT0016951 S. tuberosum 1:1690749-1695406 (+) noncoding (-1.12899)- 44 3.628 Confident lncRNA
CNT0016950 S. tuberosum 1:72456114-72477975 (-) coding (6.53258)0 (sp|P92949|FRO2_ARATH) 713 22.911 Low-confidence lncRNA
CNT0016949 S. tuberosum 1:1690749-1695406 (+) noncoding (-1.14693)- 33 3.436 Confident lncRNA