SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 4761 records in
Arabidopsis thaliana

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0043525 A. thaliana 5:26001727-26002510 (-) noncoding (-0.926974)0.00000002 (sp|Q683D7|MAF5_ARATH) 56 1.125 splicing regulationConfident lncRNA
CNT0043524 A. thaliana 5:25995041-25995298 (-) noncoding (-1.31835)0.00000000004 (sp|Q683D7|MAF5_ARATH) 38 8.38 splicing regulationConfident lncRNA
CNT0043523 A. thaliana 5:25986978-25988012 (-) noncoding (-1.31179)3e-19 (sp|Q9AT76|AGL27_ARATH) 70 13.141 splicing regulationConfident lncRNA
CNT0043522 A. thaliana 5:25984935-25990324 (-) noncoding (-1.18135)0.000000000002 (sp|Q9AT76|AGL27_ARATH) 37 3.213 splicing regulationConfident lncRNA
CNT0043521 A. thaliana 5:23394005-23394500 (+) noncoding (-1.16277)- 68 0 Confident lncRNA
CNT0043520 A. thaliana 5:4432458-4432699 (-) noncoding (-1.23614)- 39 26.777 splicing regulationConfident lncRNA
CNT0043519 A. thaliana 5:4434896-4435620 (-) noncoding (-1.15632)0.000000000008 (sp|Q8RWN2|ZIF1_ARATH) 69 28.673 splicing regulationConfident lncRNA
CNT0043518 A. thaliana 5:4438826-4439113 (-) noncoding (-1.35155)2e-17 (sp|Q94BZ1|ZIFL1_ARATH) - 16.5 splicing regulationConfident lncRNA
CNT0043517 A. thaliana 5:18114473-18114753 (-) noncoding (-1.11044)- 56 3.075 Confident lncRNA
CNT0043516 A. thaliana 5:2166300-2166517 (+) noncoding (-0.804634)- 66 21 Confident lncRNA
CNT0043515 A. thaliana 5:6423845-6424750 (-) noncoding (-1.40579)- 38 10.221 Confident lncRNA
CNT0043514 A. thaliana 5:24748045-24748293 (-) noncoding (-1.38341)- - 19.918 splicing regulationConfident lncRNA
CNT0043513 A. thaliana 5:25021739-25022379 (+) noncoding (-1.25043)7e-18 (sp|Q9STY6|RS202_ARATH) 71 7.737 splicing regulationConfident lncRNA
CNT0043512 A. thaliana 5:694861-695437 (-) noncoding (-0.94485)- 42 83.14 splicing regulationConfident lncRNA
CNT0043511 A. thaliana 5:23624253-23624642 (+) noncoding (-1.24945)0.000000000006 (sp|Q8L5Z7|SNX2A_ARATH) 42 18.831 splicing regulationConfident lncRNA
CNT0043510 A. thaliana 5:23623346-23623552 (+) noncoding (-1.34351)- - 16.587 Confident lncRNA
CNT0043509 A. thaliana 5:2892343-2893294 (+) noncoding (-1.26588)- 48 0.813 splicing regulationConfident lncRNA
CNT0043508 A. thaliana 5:15903324-15903703 (-) noncoding (-1.33104)- - 17.067 splicing regulationConfident lncRNA
CNT0043507 A. thaliana 5:15904671-15905343 (-) noncoding (-1.14992)2e-66 (sp|P49227|RL52_ARATH) 48 22.968 splicing regulation, miRNA-associatedConfident lncRNA
CNT0043506 A. thaliana 5:5691696-5692190 (+) noncoding (-0.887263)2e-36 (sp|F4KGY6|RVE1_ARATH) 82 22.691 splicing regulationConfident lncRNA
CNT0043505 A. thaliana 5:3580984-3581926 (-) noncoding (-1.03119)2e-23 (sp|Q9LFN3|PT511_ARATH) 38 235.652 Confident lncRNA
CNT0043504 A. thaliana 5:22528730-22529594 (-) noncoding (-1.1548)- 44 1.744 Confident lncRNA
CNT0043503 A. thaliana 5:22627640-22633342 (-) noncoding (-1.19784)- 55 24.458 Confident lncRNA
CNT0043502 A. thaliana 5:21513772-21514021 (-) noncoding (-1.48547)- 29 57.566 Confident lncRNA
CNT0043501 A. thaliana 5:21523169-21523453 (-) noncoding (-1.01933)- 34 8.032 Confident lncRNA
CNT0043500 A. thaliana 5:22451877-22452132 (+) noncoding (-1.132)1e-23 (sp|F4K3G5|EDM2_ARATH) 45 0 splicing regulationConfident lncRNA
CNT0043499 A. thaliana 5:22459285-22459484 (+) noncoding (-0.934455)- 66 5.33 Confident lncRNA
CNT0043498 A. thaliana 5:6921710-6922346 (+) noncoding (-1.25811)- 41 1.797 Confident lncRNA
CNT0043497 A. thaliana 5:6914104-6915253 (+) noncoding (-1.32933)- 53 0 splicing regulationConfident lncRNA
CNT0043496 A. thaliana 5:4786854-4787844 (+) noncoding (-1.14025)5e-50 (sp|P54904|P5CR1_ARATH) 58 14.152 splicing regulationConfident lncRNA
CNT0043495 A. thaliana 5:13831797-13832099 (-) noncoding (-0.889119)2e-18 (sp|Q43127|GLNA2_ARATH) 51 0.52 splicing regulationConfident lncRNA
CNT0043494 A. thaliana 5:10508115-10508919 (-) noncoding (-1.04362)- 36 0.574 Confident lncRNA
CNT0043493 A. thaliana 5:10615175-10617871 (+) noncoding (-0.858601)0.0000000000002 (sp|P92555|M1250_ARATH) 81 5.865 Confident lncRNA
CNT0043492 A. thaliana 5:10616594-10617598 (+) noncoding (-0.953651)3e-19 (sp|P08548|LIN1_NYCCO) 97 7.364 Confident lncRNA
CNT0043491 A. thaliana 5:3468016-3468582 (+) noncoding (-1.17805)- - 0.097 Confident lncRNA
CNT0043490 A. thaliana 5:3429419-3429852 (+) noncoding (-1.28631)5e-18 (sp|Q9LEV3|CBSX3_ARATH) 70 2.324 splicing regulationConfident lncRNA
CNT0043489 A. thaliana 5:3430353-3430635 (+) noncoding (-1.17567)- - 0 Confident lncRNA
CNT0043488 A. thaliana 5:17979272-17979491 (-) noncoding (-1.0138)- 39 12.616 splicing regulationConfident lncRNA
CNT0043487 A. thaliana 5:12183153-12184489 (+) noncoding (-1.18248)- 79 0 splicing regulationConfident lncRNA
CNT0043486 A. thaliana 5:7513173-7514525 (+) noncoding (-1.02644)1e-16 (sp|O04567|Y1719_ARATH) 57 3.464 Confident lncRNA
CNT0043485 A. thaliana 5:18228823-18230074 (-) noncoding (-0.960338)9e-70 (sp|Q8L746|NPR3_ARATH) 80 4.125 splicing regulationConfident lncRNA
CNT0043484 A. thaliana 5:2090163-2090493 (+) noncoding (-0.796244)0.000009 (sp|Q01417|PM1_SOYBN) 78 16.103 splicing regulationConfident lncRNA
CNT0043483 A. thaliana 5:24983813-24984042 (+) noncoding (-1.17177)- 36 1937.36 Confident lncRNA
CNT0043482 A. thaliana 5:2466822-2467178 (+) noncoding (-0.966954)- - 3.63 Confident lncRNA
CNT0043481 A. thaliana 5:17947617-17948398 (-) noncoding (-0.980925)2e-17 (sp|Q0WTY4|VPS2B_ARATH) 103 1.11 splicing regulationConfident lncRNA
CNT0043480 A. thaliana 5:8469810-8489864 (-) coding (12.2174)6e-45 (sp|Q54LN2|VP13D_DICDI) 3270 11.372 Low-confidence lncRNA
CNT0043479 A. thaliana 5:20637830-20638052 (+) noncoding (-1.15189)- 36 64.536 splicing regulationConfident lncRNA
CNT0043478 A. thaliana 5:8469810-8489864 (-) coding (12.7243)6e-45 (sp|Q54LN2|VP13D_DICDI) 3502 11.457 Low-confidence lncRNA
CNT0043477 A. thaliana 5:8469810-8489925 (-) coding (12.1563)6e-45 (sp|Q54LN2|VP13D_DICDI) 2726 11.572 Low-confidence lncRNA
CNT0043476 A. thaliana 5:10275172-10275542 (-) noncoding (-0.959831)2e-34 (sp|Q1JPL7|PME18_ARATH) 54 0 Low-confidence lncRNA