SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 4761 records in
Arabidopsis thaliana

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0043475 A. thaliana 5:10195174-10196616 (-) noncoding (-1.04232)2e-27 (sp|Q9M5A9|GPT1_ARATH) 99 0.749 Confident lncRNA
CNT0043474 A. thaliana 5:506498-507354 (-) noncoding (-0.905218)3e-33 (sp|Q38805|MT2B_ARATH) 77 3364.72 splicing regulationLow-confidence lncRNA
CNT0043473 A. thaliana 5:5058241-5058568 (+) noncoding (-1.01536)0.000000000002 (sp|O22874|EXPA8_ARATH) 80 0.559 Confident lncRNA
CNT0043472 A. thaliana 5:15844339-15845080 (-) noncoding (-1.09936)2e-68 (sp|Q9FKA5|Y5957_ARATH) 116 46.521 Confident lncRNA
CNT0043471 A. thaliana 5:19358299-19364200 (+) noncoding (-1.34831)- - 0.842 Confident lncRNA
CNT0043470 A. thaliana 5:19374233-19374486 (+) noncoding (-1.09478)- 41 19.526 Confident lncRNA
CNT0043469 A. thaliana 5:20718529-20718802 (+) noncoding (-0.830615)9e-18 (sp|Q9FI56|CLPC1_ARATH) 75 1.577 splicing regulationConfident lncRNA
CNT0043468 A. thaliana 5:20716956-20717161 (+) noncoding (-0.898591)0.000000000003 (sp|Q9FI56|CLPC1_ARATH) 54 2.587 splicing regulationConfident lncRNA
CNT0043467 A. thaliana 5:1187656-1187907 (+) noncoding (-1.23666)- - 8.571 Confident lncRNA
CNT0043466 A. thaliana 5:13578381-13579247 (+) noncoding (-1.05774)- 73 0 Confident lncRNA
CNT0043465 A. thaliana 5:24130643-24130979 (-) noncoding (-1.19618)- - 19.317 Confident lncRNA
CNT0043464 A. thaliana 5:13552638-13552951 (+) noncoding (-0.946507)- 103 1.456 Confident lncRNA
CNT0043463 A. thaliana 5:5973227-5980887 (-) noncoding (-1.12354)- 54 1.995 splicing regulation, miRNA-associatedConfident lncRNA
CNT0043462 A. thaliana 5:24021433-24023925 (-) coding (0.722331)3e-25 (sp|Q67Y83|SCP51_ARATH) 61 4.288 splicing regulationConfident lncRNA
CNT0043461 A. thaliana 5:4722037-4722305 (+) noncoding (-1.33722)- 41 27.301 splicing regulationConfident lncRNA
CNT0043460 A. thaliana 5:19285608-19285850 (+) noncoding (-1.13725)- 41 43.959 Confident lncRNA
CNT0043459 A. thaliana 5:19294639-19294840 (+) noncoding (-1.22347)- 43 2.639 Confident lncRNA
CNT0043458 A. thaliana 5:8961859-8963848 (-) noncoding (-1.01191)0.000006 (sp|Q54J55|MYBX_DICDI) 63 63.192 Confident lncRNA
CNT0043457 A. thaliana 5:8957901-8961352 (-) noncoding (-1.10167)0.000002 (sp|Q69566|U88_HHV6U) 96 16.403 Confident lncRNA
CNT0043456 A. thaliana 5:20882047-20882310 (+) noncoding (-1.17615)- 45 40.462 splicing regulationConfident lncRNA
CNT0043455 A. thaliana 5:25883159-25883405 (-) noncoding (-1.42462)5e-22 (sp|Q94JQ6|CESA6_ARATH) 72 0.27 splicing regulationConfident lncRNA
CNT0043454 A. thaliana 5:25854798-25857888 (-) noncoding (-0.739658)2e-36 (sp|F4KF27|MDA2_ARATH) 35 3.72 splicing regulationConfident lncRNA
CNT0043453 A. thaliana 5:8737842-8738151 (-) noncoding (-1.20251)3e-23 (sp|P48000|KNAT3_ARATH) 51 2.8 splicing regulationConfident lncRNA
CNT0043452 A. thaliana 5:8737046-8737680 (-) noncoding (-1.10171)5e-53 (sp|P48000|KNAT3_ARATH) 41 14.569 splicing regulationConfident lncRNA
CNT0043451 A. thaliana 5:6814552-6814911 (-) noncoding (-1.24524)- 48 113.075 splicing regulationConfident lncRNA
CNT0043450 A. thaliana 5:4538208-4538630 (-) noncoding (-1.4303)6e-25 (sp|O23653|AK2_ARATH) - 25.253 splicing regulationConfident lncRNA
CNT0043449 A. thaliana 5:4533231-4533613 (-) noncoding (-1.10307)0.0000002 (sp|Q9FMU5|UTP18_ARATH) 37 68.73 splicing regulationConfident lncRNA
CNT0043448 A. thaliana 5:4537467-4537828 (-) noncoding (-1.20762)8e-20 (sp|O23653|AK2_ARATH) 31 0.762 splicing regulationConfident lncRNA
CNT0043447 A. thaliana 5:1989310-1989533 (+) noncoding (-1.21541)- 52 3.406 Confident lncRNA
CNT0043446 A. thaliana 5:2021658-2021884 (+) noncoding (-1.14721)- 34 10.084 splicing regulationConfident lncRNA
CNT0043445 A. thaliana 5:7358816-7359680 (-) noncoding (-0.874746)- 64 26.71 splicing regulationConfident lncRNA
CNT0043444 A. thaliana 5:9807998-9808351 (+) noncoding (-1.29717)- - 0 splicing regulationConfident lncRNA
CNT0043443 A. thaliana 5:3784091-3784760 (-) noncoding (-0.960799)- 65 87.528 Confident lncRNA
CNT0043442 A. thaliana 5:20192354-20192561 (-) noncoding (-1.01631)- - 25.987 Confident lncRNA
CNT0043441 A. thaliana 5:3799407-3799908 (-) noncoding (-0.738539)- 60 12.908 splicing regulationConfident lncRNA
CNT0043440 A. thaliana 5:18263763-18264409 (-) noncoding (-1.03698)1e-33 (sp|Q9FKF0|RTL3_ARATH) 33 1.174 splicing regulationConfident lncRNA
CNT0043439 A. thaliana 5:8590130-8591191 (-) noncoding (-1.35559)3e-63 (sp|Q940T9|COL4_ARATH) 38 8.285 splicing regulation, miRNA-associatedConfident lncRNA
CNT0043438 A. thaliana 5:2995097-2996454 (+) noncoding (-1.2714)0.00000000002 (sp|Q9XFW3|MDHG2_BRANA) 52 0.151 splicing regulationConfident lncRNA
CNT0043437 A. thaliana 5:3042140-3042683 (+) noncoding (-0.841419)2e-22 (sp|Q3E7J7|FBL83_ARATH) 114 0 Low-confidence lncRNA
CNT0043436 A. thaliana 5:21448747-21449061 (+) noncoding (-1.16747)- 48 0.193 Confident lncRNA
CNT0043435 A. thaliana 5:21452835-21453074 (+) noncoding (-1.20511)- 30 2.252 splicing regulationConfident lncRNA
CNT0043434 A. thaliana 5:1392003-1392249 (-) noncoding (-1.26772)2e-21 (sp|Q0WMY5|PP365_ARATH) 34 26.219 splicing regulationConfident lncRNA
CNT0043433 A. thaliana 5:17827733-17828292 (+) noncoding (-1.28305)- 30 10.47 Confident lncRNA
CNT0043432 A. thaliana 5:17848090-17848860 (+) noncoding (-1.32263)0.000000000002 (sp|Q03968|LEA3_WHEAT) 52 26.136 Confident lncRNA
CNT0043431 A. thaliana 5:9033543-9033840 (-) noncoding (-1.1909)- - 59.435 splicing regulationConfident lncRNA
CNT0043430 A. thaliana 5:9076698-9077481 (-) noncoding (-1.08559)- 90 5.482 Confident lncRNA
CNT0043429 A. thaliana 5:22627640-22633352 (-) noncoding (-1.22317)- 55 52.03 Confident lncRNA
CNT0043428 A. thaliana 5:22631469-22633342 (-) noncoding (-1.24499)- - 15.853 Confident lncRNA
CNT0043427 A. thaliana 5:22631469-22633343 (-) noncoding (-1.23548)- - 20.475 Confident lncRNA
CNT0043426 A. thaliana 5:18975913-18976305 (-) noncoding (-1.19463)0.00000000001 (sp|Q9FIP9|MYC3_ARATH) 35 70.726 Confident lncRNA