SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 2711 records in
Physcomitrella patens

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0033577 P. patens DS545080.1:734589-736050 (+) noncoding (-1.22811)- 50 4.459 Confident lncRNA
CNT0033576 P. patens DS545080.1:617272-618461 (-) noncoding (-1.35069)- 43 3.317 Confident lncRNA
CNT0033575 P. patens DS545095.1:167794-168020 (-) noncoding (-0.937523)- 70 2.505 Confident lncRNA
CNT0033574 P. patens DS545095.1:677211-677848 (-) noncoding (-1.16145)- 60 0.617 Confident lncRNA
CNT0033573 P. patens DS545095.1:765536-765756 (-) noncoding (-1.25982)- 30 0 Confident lncRNA
CNT0033572 P. patens DS545095.1:763188-764460 (-) noncoding (-1.41823)- 48 1.854 Confident lncRNA
CNT0033571 P. patens DS545095.1:110769-111343 (+) noncoding (-1.33647)- 44 4.473 Confident lncRNA
CNT0033570 P. patens DS545095.1:711466-711948 (+) noncoding (-1.09547)- 104 0 Confident lncRNA
CNT0033569 P. patens DS545095.1:638219-639073 (+) noncoding (-1.20839)- 63 81.697 Confident lncRNA
CNT0033568 P. patens DS545095.1:763193-763543 (+) noncoding (-1.2789)- 61 0 Confident lncRNA
CNT0033567 P. patens DS545091.1:148379-151401 (-) noncoding (-1.21615)- 46 7.828 Confident lncRNA
CNT0033566 P. patens DS545091.1:459482-461516 (+) noncoding (-1.23465)0.000000001 (sp|P19684|ROC5_NICSY) 54 3.633 splicing regulationConfident lncRNA
CNT0033565 P. patens DS545091.1:328681-330046 (-) noncoding (-1.14132)- 38 19.791 Confident lncRNA
CNT0033564 P. patens DS545091.1:219589-219869 (+) noncoding (-1.45466)- 54 4.219 splicing regulationConfident lncRNA
CNT0033563 P. patens DS545091.1:180152-181804 (-) noncoding (-1.21233)- 43 1.943 Confident lncRNA
CNT0033562 P. patens DS545093.1:237081-238191 (+) noncoding (-1.19797)- 67 67.966 Confident lncRNA
CNT0033561 P. patens DS545093.1:361676-363620 (-) noncoding (-1.10751)0.00000000008 (sp|A7GT07|DNAJ_BACCN) 87 1.67 Confident lncRNA
CNT0033560 P. patens DS545093.1:384736-385459 (-) noncoding (-1.29799)- 37 0 splicing regulationConfident lncRNA
CNT0033559 P. patens DS545093.1:430427-431727 (+) noncoding (-1.24266)5e-27 (sp|P07089|RBS_FLATR) 62 6.887 splicing regulation, miRNA-associatedConfident lncRNA
CNT0033558 P. patens DS545093.1:285742-285987 (+) noncoding (-1.26033)- - 1.933 Confident lncRNA
CNT0033557 P. patens DS545093.1:283403-284002 (+) noncoding (-1.23873)- 48 1.321 Confident lncRNA
CNT0033556 P. patens DS545089.1:198915-199341 (+) noncoding (-1.28877)- 32 2.27 splicing regulationConfident lncRNA
CNT0033555 P. patens DS545089.1:772002-788657 (+) coding (15.5457)8e-87 (sp|Q9SGH2|MBD9_ARATH) 3030 4.733 Low-confidence lncRNA
CNT0033554 P. patens DS545089.1:772002-788657 (+) coding (17.7323)7e-90 (sp|Q9SGH2|MBD9_ARATH) 3760 5.846 Low-confidence lncRNA
CNT0033553 P. patens DS545089.1:772002-788657 (+) coding (17.7963)1e-86 (sp|Q9SGH2|MBD9_ARATH) 3777 5.821 Low-confidence lncRNA
CNT0033552 P. patens DS545098.1:357190-357509 (-) noncoding (-1.39305)- 74 1.777 splicing regulationConfident lncRNA
CNT0033551 P. patens DS545098.1:676809-720493 (-) noncoding (-1.38678)- 58 69.967 Confident lncRNA
CNT0033550 P. patens DS545098.1:555050-555866 (+) noncoding (-1.39927)- - 10.651 Confident lncRNA
CNT0033549 P. patens DS545098.1:735324-736028 (+) noncoding (-1.39587)- 34 11.444 Confident lncRNA
CNT0033548 P. patens DS545099.1:634300-634807 (+) noncoding (-1.1474)- 47 18.125 Confident lncRNA
CNT0033547 P. patens DS545099.1:632332-632583 (-) noncoding (-1.21817)- 42 1.282 Confident lncRNA
CNT0033546 P. patens DS545094.1:125922-126295 (-) noncoding (-1.12811)- 49 2.589 Confident lncRNA
CNT0033545 P. patens DS545094.1:162989-164560 (+) noncoding (-1.46011)1e-36 (sp|Q8L765|BPM1_ARATH) 42 13.461 splicing regulation, miRNA-associatedConfident lncRNA
CNT0033544 P. patens DS545100.1:760985-761820 (-) noncoding (-1.1678)- 57 26.594 Confident lncRNA
CNT0033543 P. patens DS545100.1:768912-769176 (+) noncoding (-1.28728)- - 4.454 splicing regulationConfident lncRNA
CNT0033542 P. patens DS545100.1:772845-774105 (+) noncoding (-1.36988)- 116 0 Confident lncRNA
CNT0033541 P. patens DS545100.1:731906-732349 (+) noncoding (-1.23066)- 42 0 splicing regulationConfident lncRNA
CNT0033540 P. patens DS545100.1:730098-732720 (-) noncoding (-1.2208)- 108 3.002 Confident lncRNA
CNT0033539 P. patens DS545100.1:291961-293267 (+) noncoding (-1.26161)- 40 28.856 splicing regulationConfident lncRNA
CNT0033538 P. patens DS545101.1:192339-193260 (+) noncoding (-1.20663)- 48 16.855 Confident lncRNA
CNT0033537 P. patens DS545101.1:191951-193260 (+) noncoding (-1.16052)- 64 9.162 Confident lncRNA
CNT0033536 P. patens DS545101.1:535942-536380 (-) noncoding (-1.39142)- 58 2.782 Confident lncRNA
CNT0033535 P. patens DS545101.1:317666-318976 (-) noncoding (-1.13061)- 83 4.095 Confident lncRNA
CNT0033534 P. patens DS545102.1:332700-333507 (+) noncoding (-1.32753)- 53 8.462 Confident lncRNA
CNT0033533 P. patens DS545102.1:398999-399523 (+) noncoding (-1.27214)1e-17 (sp|Q9XE58|SCL14_ARATH) 83 2.167 splicing regulationConfident lncRNA
CNT0033532 P. patens DS545103.1:168492-172730 (-) noncoding (-1.14026)- 96 0.302 splicing regulationConfident lncRNA
CNT0033531 P. patens DS545103.1:225335-228513 (-) noncoding (-1.12682)0.000000000001 (sp|A9RLK6|CSPLG_PHYPA) 65 1.283 splicing regulationConfident lncRNA
CNT0033530 P. patens DS545103.1:738120-738342 (+) noncoding (-1.25047)- 29 26.219 splicing regulationConfident lncRNA
CNT0033529 P. patens DS545103.1:262201-264065 (-) noncoding (-1.3349)8e-20 (sp|Q7DLS1|PSB7B_ARATH) 56 11.518 Confident lncRNA
CNT0033528 P. patens DS545103.1:262201-264153 (-) noncoding (-1.3182)7e-31 (sp|Q7DLS1|PSB7B_ARATH) 69 11.674 Confident lncRNA