SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 2711 records in
Physcomitrella patens

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0033677 P. patens DS545064.1:49326-50262 (+) noncoding (-1.37212)- 56 2.319 Confident lncRNA
CNT0033676 P. patens DS545064.1:526629-528145 (+) noncoding (-0.992652)0.0000002 (sp|Q9M6A3|ASC1_SOLLC) 77 16.378 Confident lncRNA
CNT0033675 P. patens DS545064.1:58321-62201 (+) noncoding (-0.998811)0.0000000002 (sp|Q7T2T1|CELF2_CHICK) 66 16.704 Confident lncRNA
CNT0033674 P. patens DS545064.1:462199-463870 (-) noncoding (-1.13814)4e-146 (sp|P0CH33|UBQ11_ARATH) 64 5.325 splicing regulation, miRNA-associatedConfident lncRNA
CNT0033673 P. patens DS545064.1:473208-474152 (-) noncoding (-1.31465)- 49 1.305 Confident lncRNA
CNT0033672 P. patens DS545071.1:491458-493176 (+) noncoding (-1.05444)- 32 2.229 Confident lncRNA
CNT0033671 P. patens DS545071.1:839886-841649 (-) noncoding (-1.38364)- 53 21.11 Confident lncRNA
CNT0033670 P. patens DS545071.1:839886-841712 (-) noncoding (-1.22252)- 74 20.808 Confident lncRNA
CNT0033669 P. patens DS545070.1:635352-637896 (+) noncoding (-1.01745)0.00000000002 (sp|Q6ID77|MED11_ARATH) 75 4.14 Confident lncRNA
CNT0033668 P. patens DS545070.1:256707-257663 (-) noncoding (-0.972508)- 36 0.868 Confident lncRNA
CNT0033667 P. patens DS545070.1:184234-185581 (-) noncoding (-1.0583)- 63 2.012 Confident lncRNA
CNT0033666 P. patens DS545073.1:572177-572759 (-) noncoding (-1.18648)- 51 0 splicing regulationConfident lncRNA
CNT0033665 P. patens DS545073.1:567825-568639 (-) noncoding (-1.06963)- 88 0 Confident lncRNA
CNT0033664 P. patens DS545073.1:733936-734640 (-) noncoding (-1.37618)- - 2.996 Confident lncRNA
CNT0033663 P. patens DS545073.1:176165-177060 (+) noncoding (-1.29165)- 67 8.488 Confident lncRNA
CNT0033662 P. patens DS545073.1:240980-243421 (-) noncoding (-1.28661)- 76 6.335 Confident lncRNA
CNT0033661 P. patens DS545075.1:218885-219276 (+) noncoding (-1.13393)- - 0.618 splicing regulationConfident lncRNA
CNT0033660 P. patens DS545074.1:345056-346103 (+) noncoding (-0.787584)- 122 2.183 Confident lncRNA
CNT0033659 P. patens DS545074.1:569110-571043 (-) noncoding (-1.04806)- 109 5.642 Confident lncRNA
CNT0033658 P. patens DS545078.1:275103-276624 (-) noncoding (-0.956541)- 66 10.871 Confident lncRNA
CNT0033657 P. patens DS545078.1:807290-809840 (+) noncoding (-0.884079)9e-17 (sp|Q9LDY9|IOJAC_ARATH) 103 13.951 Confident lncRNA
CNT0033656 P. patens DS545104.1:616906-618943 (-) noncoding (-1.36755)- 64 6.969 Confident lncRNA
CNT0033655 P. patens DS545104.1:616906-618968 (-) noncoding (-1.37247)- 45 9.77 Confident lncRNA
CNT0033654 P. patens DS545104.1:342351-345964 (-) noncoding (-1.08681)- 72 6.759 Confident lncRNA
CNT0033653 P. patens DS545104.1:838706-840631 (+) noncoding (-0.978307)1e-26 (sp|P58728|SF3BB_ARATH) 76 43.283 Confident lncRNA
CNT0033652 P. patens DS545104.1:620725-622168 (-) noncoding (-1.3073)- 108 3.555 Confident lncRNA
CNT0033651 P. patens DS545104.1:621394-622037 (-) noncoding (-1.32873)- 48 3.065 Confident lncRNA
CNT0033650 P. patens DS545076.1:412572-444978 (-) noncoding (-1.13461)0.00000000000001 (sp|Q9MUJ2|PSAA_PSINU) 177 0 miRNA-associatedConfident lncRNA
CNT0033649 P. patens DS545076.1:353177-353653 (+) noncoding (-1.2782)- - 0.339 Confident lncRNA
CNT0033648 P. patens DS545076.1:496809-498763 (+) noncoding (-1.23816)- 62 25.311 Confident lncRNA
CNT0033647 P. patens DS545076.1:44028-44792 (-) noncoding (-1.22888)- 39 4.391 Confident lncRNA
CNT0033646 P. patens DS545077.1:578543-579749 (+) noncoding (-1.37963)- 91 0.377 Confident lncRNA
CNT0033645 P. patens DS545077.1:739456-741359 (-) noncoding (-1.27676)- 55 10.98 Confident lncRNA
CNT0033644 P. patens DS545077.1:685920-686319 (+) noncoding (-1.191)0.000004 (sp|Q39123|ATHB8_ARATH) 54 0 splicing regulationConfident lncRNA
CNT0033643 P. patens DS545077.1:688662-689352 (+) noncoding (-1.17057)- 153 0 Confident lncRNA
CNT0033642 P. patens DS545077.1:563942-565046 (+) noncoding (-0.989439)0.0000009 (sp|Q9SH88|RRS1_ARATH) 60 16.86 splicing regulationConfident lncRNA
CNT0033641 P. patens DS545077.1:498304-499723 (+) noncoding (-1.25993)7e-24 (sp|P10978|POLX_TOBAC) 37 1.594 Confident lncRNA
CNT0033640 P. patens DS545097.1:619840-620140 (+) noncoding (-1.28716)- - 1.58 Confident lncRNA
CNT0033639 P. patens DS545097.1:224128-225772 (-) noncoding (-1.00003)- 125 0.393 Confident lncRNA
CNT0033638 P. patens DS545097.1:522045-523414 (-) noncoding (-1.25184)- 83 8.886 Confident lncRNA
CNT0033637 P. patens DS545097.1:522045-523319 (-) noncoding (-1.19169)- 101 5.102 Confident lncRNA
CNT0033636 P. patens DS545097.1:809969-810620 (-) noncoding (-1.21049)- 78 35.915 Confident lncRNA
CNT0033635 P. patens DS545097.1:108737-109977 (+) noncoding (-1.26141)- - 42.974 Confident lncRNA
CNT0033634 P. patens DS545097.1:210262-212200 (-) noncoding (-1.3706)- 55 4.194 Confident lncRNA
CNT0033633 P. patens DS545097.1:668993-669474 (+) noncoding (-1.26891)- 34 2.655 splicing regulationConfident lncRNA
CNT0033632 P. patens DS545097.1:699697-700164 (+) noncoding (-1.09588)- 29 0.912 splicing regulationConfident lncRNA
CNT0033631 P. patens DS545083.1:479062-479904 (+) noncoding (-1.14179)- 140 3.34 Confident lncRNA
CNT0033630 P. patens DS545083.1:476115-476868 (+) noncoding (-1.20657)- 88 3.716 Confident lncRNA
CNT0033629 P. patens DS545083.1:158938-159223 (-) noncoding (-1.0993)- 47 0 Confident lncRNA
CNT0033628 P. patens DS545083.1:157935-158247 (-) noncoding (-1.04266)- 58 0 Confident lncRNA