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lncRNA id
CPC status
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Found 2711 records in
Physcomitrella patens

CPC status:   #
Max. peptide length:   #
Max. expression:   #
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Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0033327 P. patens DS545153.1:197169-200011 (-) noncoding (-1.1573)0.0000000000003 (sp|P10978|POLX_TOBAC) 82 12.122 Confident lncRNA
CNT0033326 P. patens DS545153.1:197169-199922 (-) noncoding (-1.14884)0.000000000000001 (sp|P10978|POLX_TOBAC) 94 12.636 Confident lncRNA
CNT0033325 P. patens DS545153.1:197169-199738 (-) noncoding (-1.14116)0.000000000000001 (sp|P10978|POLX_TOBAC) 84 11.15 Confident lncRNA
CNT0033324 P. patens DS545153.1:99643-101186 (-) noncoding (-0.848551)- 122 10.888 Confident lncRNA
CNT0033323 P. patens DS545153.1:10637-12196 (-) noncoding (-1.40718)- 71 3.281 Confident lncRNA
CNT0033322 P. patens DS545153.1:10637-12196 (-) noncoding (-1.36474)- 71 2.627 Confident lncRNA
CNT0033321 P. patens DS545153.1:9149-10561 (-) noncoding (-1.21523)- 58 1.201 Confident lncRNA
CNT0033320 P. patens DS545153.1:528331-528735 (+) noncoding (-1.15798)2e-27 (sp|P19866|G3PA_SPIOL) 135 31.68 splicing regulationConfident lncRNA
CNT0033319 P. patens DS545153.1:597298-597627 (-) noncoding (-1.20737)- - 5.979 Confident lncRNA
CNT0033318 P. patens DS545150.1:52484-68620 (-) coding (9.23447)0 (sp|Q6IMT1|SAB_ARATH) 2736 4.822 Low-confidence lncRNA
CNT0033317 P. patens DS545150.1:52484-68620 (-) coding (9.24856)0 (sp|Q6IMT1|SAB_ARATH) 2735 4.687 Low-confidence lncRNA
CNT0033316 P. patens DS545150.1:52484-68620 (-) coding (9.24789)0 (sp|Q6IMT1|SAB_ARATH) 2740 4.555 Low-confidence lncRNA
CNT0033315 P. patens DS545152.1:144407-145044 (+) noncoding (-1.24973)- 41 0 splicing regulation, miRNA-associatedConfident lncRNA
CNT0033314 P. patens DS545152.1:153917-154689 (-) noncoding (-1.04484)- 59 2.024 Confident lncRNA
CNT0033313 P. patens DS545152.1:354016-355793 (+) noncoding (-0.932551)- 55 1.623 Confident lncRNA
CNT0033312 P. patens DS545152.1:353945-355793 (+) noncoding (-0.964631)- 60 1.846 Confident lncRNA
CNT0033311 P. patens DS545156.1:71832-72536 (+) noncoding (-1.38523)- 33 0 Confident lncRNA
CNT0033310 P. patens DS545154.1:323378-336185 (+) coding (7.36091)0 (sp|Q766Z3|REV3_ARATH) 2373 6.098 Low-confidence lncRNA
CNT0033309 P. patens DS545158.1:201020-202966 (+) noncoding (-1.13051)2e-17 (sp|A7S6Y0|SYS1_NEMVE) 60 12.148 Confident lncRNA
CNT0033308 P. patens DS545158.1:588811-589860 (+) noncoding (-1.32357)- 40 3.061 Confident lncRNA
CNT0033307 P. patens DS545155.1:578273-578703 (+) noncoding (-1.12434)- 32 3.54 Confident lncRNA
CNT0033306 P. patens DS545155.1:191175-193428 (+) noncoding (-1.19497)- 68 19.131 Confident lncRNA
CNT0033305 P. patens DS545159.1:552179-552954 (-) noncoding (-1.16125)- 39 3.539 Confident lncRNA
CNT0033304 P. patens DS545159.1:522916-524846 (+) noncoding (-0.98586)6e-21 (sp|Q2HIM5|MMGT_ARATH) 53 21.683 Confident lncRNA
CNT0033303 P. patens DS545159.1:523280-524846 (+) noncoding (-1.20528)4e-16 (sp|Q2HIM5|MMGT_ARATH) 53 22.103 Confident lncRNA
CNT0033302 P. patens DS545159.1:540046-540438 (-) noncoding (-1.08798)- 50 1.447 splicing regulationConfident lncRNA
CNT0033301 P. patens DS545202.1:33519-34740 (-) noncoding (-1.34467)- 44 4.785 splicing regulationConfident lncRNA
CNT0033300 P. patens DS545160.1:162068-162933 (-) noncoding (-1.14737)- 54 8.067 Confident lncRNA
CNT0033299 P. patens DS545160.1:327567-329248 (-) noncoding (-1.25368)1e-22 (sp|P10978|POLX_TOBAC) 42 116.109 Confident lncRNA
CNT0033298 P. patens DS545160.1:432819-435098 (+) noncoding (-1.26885)- 72 32.85 Confident lncRNA
CNT0033297 P. patens DS545160.1:461425-462422 (-) noncoding (-0.856628)- 48 1.29 Confident lncRNA
CNT0033296 P. patens DS545157.1:594882-595307 (+) noncoding (-1.44302)- 48 0 splicing regulationConfident lncRNA
CNT0033295 P. patens DS545157.1:551628-552673 (+) noncoding (-1.27632)- 100 2.257 splicing regulationConfident lncRNA
CNT0033294 P. patens DS545161.1:169872-170575 (-) noncoding (-1.15449)- 31 3.608 Confident lncRNA
CNT0033293 P. patens DS545161.1:169872-170549 (-) noncoding (-1.08408)- 64 5.188 Confident lncRNA
CNT0033292 P. patens DS545164.1:300484-303934 (+) noncoding (-1.21495)- 66 4.222 Confident lncRNA
CNT0033291 P. patens DS545164.1:302591-303934 (+) noncoding (-1.15198)- 66 2.23 Confident lncRNA
CNT0033290 P. patens DS545164.1:510795-511634 (+) noncoding (-1.18077)- 39 15.921 Confident lncRNA
CNT0033289 P. patens DS545163.1:526478-530686 (-) noncoding (-1.23917)- 89 16.309 Confident lncRNA
CNT0033288 P. patens DS545163.1:526478-530735 (-) noncoding (-1.20398)- 89 20.619 Confident lncRNA
CNT0033287 P. patens DS545162.1:70918-71418 (+) noncoding (-1.34608)- 30 2.169 splicing regulationConfident lncRNA
CNT0033286 P. patens DS545166.1:419668-420246 (+) noncoding (-1.07458)0.00000003 (sp|Q9JLJ4|ELOV2_MOUSE) 50 10.546 splicing regulationConfident lncRNA
CNT0033285 P. patens DS545166.1:521938-522398 (+) noncoding (-1.44405)- - 3.535 splicing regulationConfident lncRNA
CNT0033284 P. patens DS545166.1:370418-372063 (-) noncoding (-1.18909)- 84 1.814 Confident lncRNA
CNT0033283 P. patens DS545166.1:306382-307649 (-) noncoding (-1.30482)0.0000000001 (sp|Q9FLH8|SCRK7_ARATH) 51 0 splicing regulationConfident lncRNA
CNT0033282 P. patens DS545170.1:416806-417156 (-) noncoding (-1.54259)- 63 0 Confident lncRNA
CNT0033281 P. patens DS545170.1:422020-422620 (-) noncoding (-1.27682)- 51 0 Confident lncRNA
CNT0033280 P. patens DS545170.1:7204-8373 (+) noncoding (-1.16161)- 95 0.188 Confident lncRNA
CNT0033279 P. patens DS545170.1:205162-207634 (-) noncoding (-1.22702)- 86 3.538 Confident lncRNA
CNT0033278 P. patens DS545170.1:91177-93167 (-) noncoding (-1.29709)0.0000002 (sp|Q3KRA9|ALKB6_HUMAN) 44 2.183 splicing regulationConfident lncRNA