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Found 2711 records in
Physcomitrella patens

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
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Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0033177 P. patens DS545184.1:16216-18837 (+) noncoding (-1.12029)- 71 31.629 Confident lncRNA
CNT0033176 P. patens DS545195.1:78324-80376 (-) noncoding (-1.23755)- 88 0 splicing regulationConfident lncRNA
CNT0033175 P. patens DS545188.1:23446-24003 (+) noncoding (-1.10019)0.0000004 (sp|O81645|VILI3_ARATH) 45 2.918 splicing regulationConfident lncRNA
CNT0033174 P. patens DS545188.1:23019-24003 (+) noncoding (-1.15355)0.00000001 (sp|O81645|VILI3_ARATH) 45 2.725 splicing regulationConfident lncRNA
CNT0033173 P. patens DS545188.1:53506-54061 (+) noncoding (-1.06671)- 51 1.183 Confident lncRNA
CNT0033172 P. patens DS545188.1:349262-350620 (+) noncoding (-1.05735)- 55 2.481 Confident lncRNA
CNT0033171 P. patens DS545188.1:153397-154107 (-) noncoding (-1.14386)- 43 1.068 Confident lncRNA
CNT0033170 P. patens DS545188.1:415727-416757 (+) noncoding (-1.01329)- 98 4.172 Confident lncRNA
CNT0033169 P. patens DS545196.1:35527-37115 (+) noncoding (-1.28073)3e-37 (sp|Q59536|PTRB_MORLA) 65 5.388 splicing regulationConfident lncRNA
CNT0033168 P. patens DS545196.1:441470-441988 (+) noncoding (-1.45571)- 47 0 splicing regulationConfident lncRNA
CNT0033167 P. patens DS545196.1:333018-333249 (+) noncoding (-1.12981)- 41 1.367 splicing regulationConfident lncRNA
CNT0033166 P. patens DS545196.1:333391-333900 (+) noncoding (-1.27786)- 37 4.793 Confident lncRNA
CNT0033165 P. patens DS545196.1:334202-336501 (+) noncoding (-1.11655)7e-36 (sp|Q9SIC9|PP178_ARATH) 61 1.299 Confident lncRNA
CNT0033164 P. patens DS545198.1:135393-138782 (+) noncoding (-1.06426)9e-37 (sp|Q41542|XTH_WHEAT) 143 1.611 splicing regulationConfident lncRNA
CNT0033163 P. patens DS545198.1:135393-138782 (+) noncoding (-1.06926)6e-49 (sp|Q41542|XTH_WHEAT) 143 2.391 splicing regulationConfident lncRNA
CNT0033162 P. patens DS545198.1:258486-259998 (-) noncoding (-1.27863)- 51 1.183 splicing regulationConfident lncRNA
CNT0033161 P. patens DS545198.1:414467-414747 (-) noncoding (-1.19405)4e-19 (sp|Q9FX54|G3PC2_ARATH) 75 16.19 splicing regulationConfident lncRNA
CNT0033160 P. patens DS545198.1:457722-458111 (-) noncoding (-1.36501)- 41 2.531 Confident lncRNA
CNT0033159 P. patens DS545198.1:460970-461293 (-) noncoding (-1.38922)7e-19 (sp|Q9FX54|G3PC2_ARATH) 59 9.253 splicing regulationConfident lncRNA
CNT0033158 P. patens DS545198.1:460455-460856 (-) noncoding (-0.949844)9e-21 (sp|P24750|G3P_ESCHE) 81 8.101 splicing regulationConfident lncRNA
CNT0033157 P. patens DS545198.1:188462-188936 (+) noncoding (-1.28416)- 39 115.695 Confident lncRNA
CNT0033156 P. patens DS545199.1:319851-320545 (-) noncoding (-0.950094)- 81 8.661 Confident lncRNA
CNT0033155 P. patens DS545199.1:263205-265343 (-) noncoding (-1.11985)0.000000000001 (sp|Q9LS54|VQ20_ARATH) 92 40.483 splicing regulationConfident lncRNA
CNT0033154 P. patens DS545199.1:274722-275310 (-) noncoding (-1.10016)- 34 0.478 Confident lncRNA
CNT0033153 P. patens DS545200.1:382726-383523 (+) noncoding (-1.38038)- 38 10.709 Confident lncRNA
CNT0033152 P. patens DS545200.1:316909-318548 (-) noncoding (-1.18532)- 82 0.098 Confident lncRNA
CNT0033151 P. patens DS545200.1:451728-453170 (+) noncoding (-0.983261)- 113 0 Confident lncRNA
CNT0033150 P. patens DS545200.1:166491-167765 (+) noncoding (-1.21318)2e-16 (sp|Q9LFN6|RH56_ARATH) 47 0.617 splicing regulationConfident lncRNA
CNT0033149 P. patens DS545200.1:59958-60299 (-) noncoding (-1.28733)- 32 5.264 splicing regulationConfident lncRNA
CNT0033148 P. patens DS545200.1:453568-454631 (+) noncoding (-1.17461)3e-38 (sp|Q8RXL8|Y1689_ARATH) 43 1.148 splicing regulationConfident lncRNA
CNT0033147 P. patens DS545200.1:136099-151637 (+) coding (6.97094)0 (sp|O23372|ATXR3_ARATH) 2571 7.628 Low-confidence lncRNA
CNT0033146 P. patens DS545201.1:169590-186752 (-) coding (10.8698)1e-120 (sp|O75691|UTP20_HUMAN) 2886 10.426 Low-confidence lncRNA
CNT0033145 P. patens DS545201.1:169590-186752 (-) coding (10.8822)1e-120 (sp|O75691|UTP20_HUMAN) 2874 10.465 Low-confidence lncRNA
CNT0033144 P. patens DS545206.1:202092-203477 (-) noncoding (-1.23229)- 72 1.296 Confident lncRNA
CNT0033143 P. patens DS545206.1:427501-427864 (-) noncoding (-1.24748)- 54 5.97 Confident lncRNA
CNT0033142 P. patens DS545206.1:321094-324034 (+) noncoding (-1.31784)- 58 10.471 Confident lncRNA
CNT0033141 P. patens DS545206.1:321109-324034 (+) noncoding (-1.33576)- 57 10.566 Confident lncRNA
CNT0033140 P. patens DS545205.1:78188-78962 (+) noncoding (-1.02553)0.00000009 (sp|Q9XEK6|RS14_TORRU) 61 9.356 splicing regulationConfident lncRNA
CNT0033139 P. patens DS545205.1:92614-93694 (+) noncoding (-1.39037)- 38 2.331 splicing regulationConfident lncRNA
CNT0033138 P. patens DS545205.1:476191-476682 (+) noncoding (-0.953445)- 46 4.48 Confident lncRNA
CNT0033137 P. patens DS545204.1:126656-130233 (-) noncoding (-1.08917)4e-18 (sp|Q1MTE5|ARL3_DANRE) 58 3.507 Confident lncRNA
CNT0033136 P. patens DS545204.1:469627-470144 (-) noncoding (-1.23159)- 38 1.572 Confident lncRNA
CNT0033135 P. patens DS545204.1:439591-440055 (-) noncoding (-0.8187)6e-29 (sp|Q93V56|IPYR1_ARATH) 37 0.451 Confident lncRNA
CNT0033134 P. patens DS545204.1:36286-37036 (+) noncoding (-1.10949)- 56 4.162 Confident lncRNA
CNT0033133 P. patens DS545229.1:441285-443642 (+) noncoding (-1.1238)5e-27 (sp|P10978|POLX_TOBAC) 66 1.99 Confident lncRNA
CNT0033132 P. patens DS545229.1:393494-394013 (+) noncoding (-1.04706)- 31 2.52 Confident lncRNA
CNT0033131 P. patens DS545229.1:391323-393362 (+) noncoding (-0.168219)1e-27 (sp|Q9M4C4|PFD4_AVEFA) 51 26.156 Confident lncRNA
CNT0033130 P. patens DS545229.1:440649-441129 (+) noncoding (-1.06008)- 58 5.373 Confident lncRNA
CNT0033129 P. patens DS545229.1:15808-16726 (-) noncoding (-1.06101)- 42 1.962 Confident lncRNA
CNT0033128 P. patens DS545229.1:15808-16726 (-) noncoding (-0.892709)- 51 2.223 Confident lncRNA