SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0014848 S. tuberosum 4:8232123-8232766 (-) noncoding (-0.733721)- 108 22.178 Confident lncRNA
CNT0014847 S. tuberosum 4:66154866-66155910 (-) noncoding (-0.84662)9e-25 (sp|Q9T068|EPFL2_ARATH) 139 0.225 Low-confidence lncRNA
CNT0014846 S. tuberosum 4:66149388-66151676 (-) noncoding (-0.119722)2e-21 (sp|O80594|ERG28_ARATH) 113 0.669 splicing regulationConfident lncRNA
CNT0014845 S. tuberosum 4:55224733-55224951 (+) noncoding (-1.26313)- 51 0 Confident lncRNA
CNT0014844 S. tuberosum 4:55225273-55225555 (+) noncoding (-0.943636)- 94 0 Confident lncRNA
CNT0014843 S. tuberosum 4:55227852-55229967 (+) noncoding (-1.12633)- 111 0.461 splicing regulationConfident lncRNA
CNT0014842 S. tuberosum 4:55232269-55232572 (+) noncoding (-1.11455)- 54 0 Confident lncRNA
CNT0014841 S. tuberosum 4:55222659-55223133 (+) noncoding (-1.14385)- 66 0 Confident lncRNA
CNT0014840 S. tuberosum 4:55233478-55233795 (+) noncoding (-1.34568)- - 5.723 Confident lncRNA
CNT0014839 S. tuberosum 4:49258082-49260430 (-) noncoding (-1.3049)0 (sp|P93531|C71D7_SOLCH) 156 0 splicing regulation, miRNA-associatedConfident lncRNA
CNT0014838 S. tuberosum 4:49258082-49273726 (-) noncoding (-1.19464)0 (sp|P93531|C71D7_SOLCH) 156 0 splicing regulationConfident lncRNA
CNT0014837 S. tuberosum 4:11060875-11064974 (+) noncoding (-0.670018)0.0000000000002 (sp|A8GY80|RL33_RICB8) 60 11.216 Confident lncRNA
CNT0014836 S. tuberosum 4:11063308-11064974 (+) noncoding (-0.736105)0.0000000000003 (sp|A8GY80|RL33_RICB8) 60 8.608 Confident lncRNA
CNT0014835 S. tuberosum 4:60576182-60577736 (+) noncoding (-0.526294)6e-113 (sp|Q6Z2G9|TLP5_ORYSJ) 257 46.953 Low-confidence lncRNA
CNT0014834 S. tuberosum 4:46642063-46824547 (+) coding (0.115861)1e-41 (sp|P10978|POLX_TOBAC) 471 12.483 splicing regulationLow-confidence lncRNA
CNT0014833 S. tuberosum 4:39354580-39354865 (+) noncoding (-1.31878)- - 0 Confident lncRNA
CNT0014832 S. tuberosum 4:39361280-39370863 (+) noncoding (-1.10592)- 91 0 splicing regulationConfident lncRNA
CNT0014831 S. tuberosum 4:5421592-5425031 (-) noncoding (-1.17269)0.0000001 (sp|P10967|ACCH3_SOLLC) - 0 Confident lncRNA
CNT0014830 S. tuberosum 4:39361280-39370863 (+) noncoding (-1.10817)- 91 0 splicing regulationConfident lncRNA
CNT0014829 S. tuberosum 4:39370962-39373529 (+) noncoding (-1.1141)- 89 0 Confident lncRNA
CNT0014828 S. tuberosum 4:39313751-39359001 (+) noncoding (-1.29895)- 41 0 Confident lncRNA
CNT0014827 S. tuberosum 4:64639473-64643890 (-) noncoding (-0.699318)- 88 0 Confident lncRNA
CNT0014826 S. tuberosum 4:64658767-64660204 (-) noncoding (-0.0738467)- 189 0.17 Confident lncRNA
CNT0014825 S. tuberosum 4:66898446-66898709 (+) noncoding (-1.3501)- 30 0 Confident lncRNA
CNT0014824 S. tuberosum 4:70627139-70627593 (+) noncoding (-1.00305)- 60 0 Confident lncRNA
CNT0014823 S. tuberosum 4:59023227-59086661 (+) coding (0.216294)0.0000000000003 (sp|Q7M4S9|YB113_YEAST) 278 754.635 Confident lncRNA
CNT0014822 S. tuberosum 4:59030025-59086661 (+) coding (1.08335)2e-29 (sp|Q4L9P0|SRAP_STAHJ) 402 906.494 Confident lncRNA
CNT0014821 S. tuberosum 4:4810167-4813528 (-) noncoding (-1.15464)- 66 0 splicing regulationConfident lncRNA
CNT0014820 S. tuberosum 4:66390523-66398903 (-) noncoding (-0.876217)3e-129 (sp|O81832|Y4729_ARATH) 62 0.252 splicing regulationConfident lncRNA
CNT0014819 S. tuberosum 4:66390523-66393969 (-) noncoding (-1.02638)3e-124 (sp|O81832|Y4729_ARATH) 52 0 splicing regulationConfident lncRNA
CNT0014818 S. tuberosum 4:66364534-66414819 (-) noncoding (-1.12788)7e-124 (sp|O81832|Y4729_ARATH) 49 0 splicing regulationConfident lncRNA
CNT0014817 S. tuberosum 4:66366352-66393968 (-) noncoding (-1.18138)1e-75 (sp|O81833|SD11_ARATH) - 0 splicing regulationConfident lncRNA
CNT0014816 S. tuberosum 4:66382599-66393967 (-) noncoding (-1.18768)4e-90 (sp|O81833|SD11_ARATH) - 0.125 splicing regulationConfident lncRNA
CNT0014815 S. tuberosum 4:66380785-66398903 (-) noncoding (-0.862041)1e-136 (sp|O81832|Y4729_ARATH) 62 0.296 splicing regulationConfident lncRNA
CNT0014814 S. tuberosum 4:28138690-28143340 (-) noncoding (-1.25939)2e-35 (sp|Q7LHG5|YI31B_YEAST) 96 0 splicing regulationConfident lncRNA
CNT0014813 S. tuberosum 4:49707951-49713077 (-) noncoding (-1.06104)5e-23 (sp|Q9M077|AUR1_ARATH) 149 99.26 Confident lncRNA
CNT0014812 S. tuberosum 4:49707951-49713137 (-) noncoding (-1.06575)7e-23 (sp|Q9M077|AUR1_ARATH) 140 100.563 Confident lncRNA
CNT0014811 S. tuberosum 4:49707951-49713061 (-) noncoding (-1.03893)2e-21 (sp|Q683C9|AUR2_ARATH) 135 89.535 Confident lncRNA
CNT0014810 S. tuberosum 4:49707951-49713077 (-) noncoding (-1.07523)3e-40 (sp|Q9M077|AUR1_ARATH) 110 85.951 Confident lncRNA
CNT0014809 S. tuberosum 4:49690418-49713137 (-) noncoding (-1.05296)5e-27 (sp|Q9FZI8|LCAT1_ARATH) 136 127.537 Confident lncRNA
CNT0014808 S. tuberosum 4:49710531-49713048 (-) noncoding (-0.997946)6e-25 (sp|Q9M077|AUR1_ARATH) 117 24.822 Confident lncRNA
CNT0014807 S. tuberosum 4:49710531-49713048 (-) noncoding (-0.984858)0.00000000001 (sp|Q9M077|AUR1_ARATH) 113 32.326 Confident lncRNA
CNT0014806 S. tuberosum 4:47780361-47783541 (-) coding (1.30204)- 417 40.203 Confident lncRNA
CNT0014805 S. tuberosum 4:71959398-71963749 (+) noncoding (-0.783942)- 93 15.36 Confident lncRNA
CNT0014804 S. tuberosum 4:71902250-71916045 (+) noncoding (-1.0437)0.000000000000005 (sp|Q8RWL4|IDM2_ARATH) 51 25.801 Confident lncRNA
CNT0014803 S. tuberosum 4:71902220-71916045 (+) noncoding (-1.19682)0.00000000000001 (sp|Q8RWL4|IDM2_ARATH) 54 16.531 Confident lncRNA
CNT0014802 S. tuberosum 4:71902220-71916045 (+) noncoding (-1.19564)0.00000000000001 (sp|Q8RWL4|IDM2_ARATH) 54 16.723 Confident lncRNA
CNT0014801 S. tuberosum 4:71902218-71916045 (+) noncoding (-1.20114)0.00000000000001 (sp|Q8RWL4|IDM2_ARATH) 54 11.868 Confident lncRNA
CNT0014800 S. tuberosum 4:45906291-45916188 (+) noncoding (-0.989975)- 83 4.096 Confident lncRNA
CNT0014799 S. tuberosum 4:62194274-62194597 (-) noncoding (-1.00856)- 30 0 Confident lncRNA