SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0012348 S. tuberosum 12:36090956-36154881 (-) noncoding (-1.19967)- 91 2.611 Confident lncRNA
CNT0012347 S. tuberosum 12:36090956-36154881 (-) noncoding (-1.04747)- 91 0 Confident lncRNA
CNT0012346 S. tuberosum 12:36421890-36422474 (-) noncoding (-1.19963)5e-31 (sp|P92519|M810_ARATH) 42 0 Confident lncRNA
CNT0012345 S. tuberosum 12:2257526-2257792 (+) noncoding (-1.21351)0.000000009 (sp|Q9LH02|FH17_ARATH) - 1.239 Confident lncRNA
CNT0012344 S. tuberosum 12:2226426-2228489 (+) noncoding (-0.413105)0.0000000000004 (sp|Q9FL92|WRK16_ARATH) 67 8.821 splicing regulationConfident lncRNA
CNT0012343 S. tuberosum 12:2258023-2258549 (+) noncoding (-0.99142)- 60 0.628 Confident lncRNA
CNT0012342 S. tuberosum 12:2298102-2298990 (+) noncoding (-1.3483)- 57 2.605 Confident lncRNA
CNT0012341 S. tuberosum 12:18964492-18967984 (+) coding (0.237255)0.000000000001 (sp|Q94AH9|MD36A_ARATH) 109 2.411 Confident lncRNA
CNT0012340 S. tuberosum 12:57663468-57664379 (+) noncoding (-1.45281)1e-28 (sp|Q0P564|CRBN_BOVIN) 53 0 Confident lncRNA
CNT0012339 S. tuberosum 12:57664562-57664858 (+) noncoding (-1.32209)- 61 0 Confident lncRNA
CNT0012338 S. tuberosum 12:7701762-7705069 (-) noncoding (-0.847594)0.0000000000007 (sp|Q9MAB3|NOP5B_ARATH) 67 6.968 Confident lncRNA
CNT0012337 S. tuberosum 12:7692477-7705715 (-) noncoding (-0.422792)0.00000000000004 (sp|Q9MAB3|NOP5B_ARATH) 136 4.652 splicing regulationConfident lncRNA
CNT0012336 S. tuberosum 12:7692477-7705715 (-) noncoding (-0.421574)0.00000000000001 (sp|Q9MAB3|NOP5B_ARATH) 137 9.285 splicing regulationConfident lncRNA
CNT0012335 S. tuberosum 12:59593924-59613352 (+) coding (0.217186)- 256 273.045 Confident lncRNA
CNT0012334 S. tuberosum 12:59592288-59611741 (+) coding (1.28533)- 383 182.424 Confident lncRNA
CNT0012333 S. tuberosum 12:59594535-59608054 (+) noncoding (-0.312696)- 206 360.713 Confident lncRNA
CNT0012332 S. tuberosum 12:59593924-59613352 (+) coding (0.300442)- 227 402.289 Confident lncRNA
CNT0012331 S. tuberosum 12:59594535-59608054 (+) coding (0.92859)- 422 328.595 Confident lncRNA
CNT0012330 S. tuberosum 12:59594535-59608054 (+) noncoding (-0.0943662)- 238 514.802 Confident lncRNA
CNT0012329 S. tuberosum 12:59594535-59613352 (+) noncoding (-0.411395)- 188 491.997 Confident lncRNA
CNT0012328 S. tuberosum 12:59603124-59603674 (+) noncoding (-0.777748)- 91 633.148 Confident lncRNA
CNT0012327 S. tuberosum 12:59603022-59611741 (+) coding (0.0773465)- 225 66.961 Confident lncRNA
CNT0012326 S. tuberosum 12:3485474-3493742 (+) noncoding (-0.120831)6e-34 (sp|Q9SYH4|NFYA5_ARATH) 252 9.559 Low-confidence lncRNA
CNT0012325 S. tuberosum 12:55277098-55277520 (-) noncoding (-1.32366)- 32 0 Confident lncRNA
CNT0012324 S. tuberosum 12:511813-516229 (+) noncoding (-0.896034)2e-41 (sp|Q9FN32|YIPL7_ARATH) 86 32.441 Low-confidence lncRNA
CNT0012323 S. tuberosum 12:13364275-13374723 (+) coding (0.063367)2e-109 (sp|Q9C7Z9|SCP18_ARATH) 233 14.671 Low-confidence lncRNA
CNT0012322 S. tuberosum 12:14685146-14687200 (+) noncoding (-1.14226)- 44 7.244 Confident lncRNA
CNT0012321 S. tuberosum 12:14685146-14687200 (+) noncoding (-1.08774)- 44 10.199 Confident lncRNA
CNT0012320 S. tuberosum 12:52342765-52347285 (-) noncoding (-1.0842)0.0000000000001 (sp|D2WKD9|SDR1_AEDAE) 108 0.506 splicing regulationConfident lncRNA
CNT0012319 S. tuberosum 12:14684057-14687200 (+) noncoding (-1.01183)- 45 3.337 Confident lncRNA
CNT0012318 S. tuberosum 12:57186109-57192231 (-) noncoding (-0.0653526)- 235 17.166 Confident lncRNA
CNT0012317 S. tuberosum 12:14684057-14687200 (+) noncoding (-1.05496)- 45 2.991 Confident lncRNA
CNT0012316 S. tuberosum 12:58842823-58843134 (-) noncoding (-1.49865)- - 0 Confident lncRNA
CNT0012315 S. tuberosum 12:58865343-58865635 (-) noncoding (-0.955385)0.000000000000006 (sp|Q40392|TMVRN_NICGU) 46 0.666 Confident lncRNA
CNT0012314 S. tuberosum 12:58843441-58846815 (-) noncoding (-1.45623)- 63 0 Confident lncRNA
CNT0012313 S. tuberosum 12:14685248-14687200 (+) noncoding (-1.07206)- 44 4.358 Confident lncRNA
CNT0012312 S. tuberosum 12:55096355-55102239 (+) noncoding (-1.10466)- 81 4.573 Confident lncRNA
CNT0012311 S. tuberosum 12:50765943-50769746 (-) noncoding (-1.0609)- 84 4.774 Confident lncRNA
CNT0012310 S. tuberosum 12:50724712-50738959 (-) coding (2.73675)1e-32 (sp|Q6P1E7|PRIPO_MOUSE) 250 3.897 Confident lncRNA
CNT0012309 S. tuberosum 12:59807222-59812171 (-) coding (0.585322)0.00000000000002 (sp|Q55FJ0|LVSG_DICDI) 441 10.035 Confident lncRNA
CNT0012308 S. tuberosum 12:59807222-59814657 (-) coding (4.13481)0.00000000000005 (sp|Q55FJ0|LVSG_DICDI) 511 7.898 Confident lncRNA
CNT0012307 S. tuberosum 12:14689181-14694554 (-) coding (0.0467327)- 144 23.562 Confident lncRNA
CNT0012306 S. tuberosum 12:47418620-47421868 (+) noncoding (-0.736914)- 105 5.032 Confident lncRNA
CNT0012305 S. tuberosum 12:47419134-47421868 (+) noncoding (-0.736914)- 105 5.032 Confident lncRNA
CNT0012304 S. tuberosum 12:47422274-47425125 (+) noncoding (-0.320888)- 139 1.434 Confident lncRNA
CNT0012303 S. tuberosum 12:59603124-59611741 (+) noncoding (-0.730917)- 103 589.988 Confident lncRNA
CNT0012302 S. tuberosum 12:14219396-14236756 (+) coding (8.64991)2e-129 (sp|Q8GYF7|NUP54_ARATH) 372 90.669 Low-confidence lncRNA
CNT0012301 S. tuberosum 12:59340978-59345583 (-) coding (4.63362)0 (sp|P80595|APY_SOLTU) 476 98.987 Low-confidence lncRNA
CNT0012300 S. tuberosum 12:46973691-46979599 (-) noncoding (-1.15554)- 84 8.344 splicing regulationConfident lncRNA
CNT0012299 S. tuberosum 12:46973691-46979599 (-) noncoding (-1.15638)- 72 15.283 splicing regulationConfident lncRNA